Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDF1P27539 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GDF1P27539 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.31■□□□□ 0.52
GDF1P27539 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.3■□□□□ 0.52
GDF1P27539 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.3■□□□□ 0.52
GDF1P27539 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GDF1P27539 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.3■□□□□ 0.52
GDF1P27539 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GDF1P27539 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.3■□□□□ 0.52
GDF1P27539 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GDF1P27539 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
GDF1P27539 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
GDF1P27539 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.3■□□□□ 0.52
GDF1P27539 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GDF1P27539 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.3■□□□□ 0.52
GDF1P27539 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
GDF1P27539 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDF1P27539 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.3■□□□□ 0.52
GDF1P27539 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
GDF1P27539 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.29■□□□□ 0.52
GDF1P27539 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.29■□□□□ 0.52
GDF1P27539 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.29■□□□□ 0.52
GDF1P27539 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.29■□□□□ 0.52
GDF1P27539 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.29■□□□□ 0.52
GDF1P27539 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.29■□□□□ 0.52
GDF1P27539 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
GDF1P27539 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.29■□□□□ 0.52
GDF1P27539 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.29■□□□□ 0.52
GDF1P27539 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GDF1P27539 AC007225.1-201ENST00000566331 1836 ntBASIC18.28■□□□□ 0.52
GDF1P27539 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.28■□□□□ 0.52
GDF1P27539 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GDF1P27539 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDF1P27539 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDF1P27539 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
GDF1P27539 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.28■□□□□ 0.52
GDF1P27539 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDF1P27539 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.28■□□□□ 0.52
GDF1P27539 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.28■□□□□ 0.52
GDF1P27539 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDF1P27539 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GDF1P27539 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDF1P27539 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDF1P27539 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.27■□□□□ 0.52
GDF1P27539 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GDF1P27539 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.27■□□□□ 0.52
GDF1P27539 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.27■□□□□ 0.52
GDF1P27539 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDF1P27539 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.27■□□□□ 0.52
GDF1P27539 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDF1P27539 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GDF1P27539 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.27■□□□□ 0.52
GDF1P27539 POM121L13P-201ENST00000422362 380 ntBASIC18.27■□□□□ 0.52
GDF1P27539 AL158047.1-201ENST00000445918 881 ntBASIC18.27■□□□□ 0.52
GDF1P27539 AC098590.1-201ENST00000468126 897 ntBASIC18.27■□□□□ 0.52
GDF1P27539 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GDF1P27539 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GDF1P27539 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.27■□□□□ 0.52
GDF1P27539 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDF1P27539 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDF1P27539 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GDF1P27539 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.27■□□□□ 0.51
GDF1P27539 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
GDF1P27539 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
GDF1P27539 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GDF1P27539 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
GDF1P27539 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.26■□□□□ 0.51
GDF1P27539 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.26■□□□□ 0.51
GDF1P27539 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GDF1P27539 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 AC023632.3-201ENST00000521633 145 ntBASIC18.26■□□□□ 0.51
GDF1P27539 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GDF1P27539 AC142381.4-202ENST00000563973 229 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms