Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.34■□□□□ 0.69
PTX3P26022 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.34■□□□□ 0.69
PTX3P26022 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX3P26022 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX3P26022 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PTX3P26022 CDCA4P2-201ENST00000441182 718 ntBASIC19.34■□□□□ 0.69
PTX3P26022 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.34■□□□□ 0.69
PTX3P26022 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PTX3P26022 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX3P26022 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX3P26022 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX3P26022 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.34■□□□□ 0.69
PTX3P26022 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX3P26022 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX3P26022 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX3P26022 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.34■□□□□ 0.69
PTX3P26022 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
PTX3P26022 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTX3P26022 DPP3P2-201ENST00000416030 1696 ntBASIC19.33■□□□□ 0.69
PTX3P26022 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTX3P26022 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTX3P26022 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTX3P26022 SMG8-203ENST00000578922 2178 ntBASIC19.33■□□□□ 0.69
PTX3P26022 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.33■□□□□ 0.69
PTX3P26022 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
PTX3P26022 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTX3P26022 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTX3P26022 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTX3P26022 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.33■□□□□ 0.69
PTX3P26022 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.33■□□□□ 0.68
PTX3P26022 AC026185.1-201ENST00000445748 174 ntBASIC19.33■□□□□ 0.68
PTX3P26022 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.33■□□□□ 0.68
PTX3P26022 AC133552.2-202ENST00000575694 574 ntBASIC19.33■□□□□ 0.68
PTX3P26022 CYP2T3P-201ENST00000601990 817 ntBASIC19.33■□□□□ 0.68
PTX3P26022 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.33■□□□□ 0.68
PTX3P26022 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.33■□□□□ 0.68
PTX3P26022 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 AC010980.2-201ENST00000587099 1412 ntBASIC19.33■□□□□ 0.68
PTX3P26022 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PTX3P26022 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX3P26022 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX3P26022 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.32■□□□□ 0.68
PTX3P26022 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTX3P26022 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PTX3P26022 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX3P26022 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX3P26022 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTX3P26022 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.32■□□□□ 0.68
PTX3P26022 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTX3P26022 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
PTX3P26022 RNF165-205ENST00000588679 2904 ntBASIC19.31■□□□□ 0.68
PTX3P26022 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTX3P26022 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.31■□□□□ 0.68
PTX3P26022 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.31■□□□□ 0.68
PTX3P26022 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.31■□□□□ 0.68
PTX3P26022 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.31■□□□□ 0.68
PTX3P26022 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.31■□□□□ 0.68
PTX3P26022 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.31■□□□□ 0.68
PTX3P26022 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTX3P26022 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.31■□□□□ 0.68
PTX3P26022 AC105020.6-201ENST00000621523 1217 ntBASIC19.31■□□□□ 0.68
PTX3P26022 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.31■□□□□ 0.68
PTX3P26022 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTX3P26022 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.31■□□□□ 0.68
PTX3P26022 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX3P26022 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTX3P26022 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTX3P26022 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTX3P26022 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTX3P26022 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.3■□□□□ 0.68
PTX3P26022 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.3■□□□□ 0.68
PTX3P26022 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTX3P26022 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.3■□□□□ 0.68
PTX3P26022 AC099778.1-201ENST00000568593 1911 ntBASIC19.3■□□□□ 0.68
PTX3P26022 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.3■□□□□ 0.68
PTX3P26022 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.3■□□□□ 0.68
PTX3P26022 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.3■□□□□ 0.68
PTX3P26022 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTX3P26022 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTX3P26022 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.3■□□□□ 0.68
PTX3P26022 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms