Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFX1P22670 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX1P22670 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFX1P22670 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX1P22670 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RFX1P22670 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX1P22670 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX1P22670 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.94■■□□□ 1.1
RFX1P22670 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
RFX1P22670 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.94■■□□□ 1.1
RFX1P22670 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFX1P22670 AL591742.1-201ENST00000604433 565 ntBASIC21.94■■□□□ 1.1
RFX1P22670 AC092118.2-201ENST00000613495 667 ntBASIC21.94■■□□□ 1.1
RFX1P22670 OR10C1-204ENST00000622521 1039 ntBASIC21.94■■□□□ 1.1
RFX1P22670 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFX1P22670 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.94■■□□□ 1.1
RFX1P22670 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.94■■□□□ 1.1
RFX1P22670 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.94■■□□□ 1.1
RFX1P22670 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.94■■□□□ 1.1
RFX1P22670 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.93■■□□□ 1.1
RFX1P22670 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 BX276092.2-201ENST00000417668 665 ntBASIC21.93■■□□□ 1.1
RFX1P22670 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 AC098590.1-201ENST00000468126 897 ntBASIC21.93■■□□□ 1.1
RFX1P22670 AC097658.1-201ENST00000475555 843 ntBASIC21.93■■□□□ 1.1
RFX1P22670 RPS2P4-201ENST00000476944 856 ntBASIC21.93■■□□□ 1.1
RFX1P22670 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.93■■□□□ 1.1
RFX1P22670 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RFX1P22670 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.93■■□□□ 1.1
RFX1P22670 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.93■■□□□ 1.1
RFX1P22670 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RFX1P22670 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.93■■□□□ 1.1
RFX1P22670 AC142381.4-202ENST00000563973 229 ntBASIC21.93■■□□□ 1.1
RFX1P22670 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.93■■□□□ 1.1
RFX1P22670 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFX1P22670 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.92■■□□□ 1.1
RFX1P22670 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RFX1P22670 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.92■■□□□ 1.1
RFX1P22670 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 AC068338.2-201ENST00000563278 1430 ntBASIC21.92■■□□□ 1.1
RFX1P22670 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RFX1P22670 GCSHP5-201ENST00000443090 522 ntBASIC21.92■■□□□ 1.1
RFX1P22670 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.92■■□□□ 1.1
RFX1P22670 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.92■■□□□ 1.1
RFX1P22670 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RFX1P22670 AC006058.3-201ENST00000606217 1069 ntBASIC21.92■■□□□ 1.1
RFX1P22670 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.92■■□□□ 1.1
RFX1P22670 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
RFX1P22670 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFX1P22670 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.91■■□□□ 1.1
RFX1P22670 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RFX1P22670 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.91■■□□□ 1.1
RFX1P22670 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.91■■□□□ 1.1
RFX1P22670 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.91■■□□□ 1.1
RFX1P22670 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.91■■□□□ 1.1
RFX1P22670 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.91■■□□□ 1.1
RFX1P22670 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.91■■□□□ 1.1
RFX1P22670 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 AC016405.3-201ENST00000607710 860 ntBASIC21.91■■□□□ 1.1
RFX1P22670 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
RFX1P22670 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.91■■□□□ 1.1
RFX1P22670 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFX1P22670 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX1P22670 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX1P22670 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX1P22670 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFX1P22670 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
RFX1P22670 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RFX1P22670 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RFX1P22670 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RFX1P22670 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.9■■□□□ 1.1
RFX1P22670 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.9■■□□□ 1.1
RFX1P22670 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.9■■□□□ 1.1
RFX1P22670 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RFX1P22670 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RFX1P22670 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms