Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.66■■□□□ 1.06
CD58P19256 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CD58P19256 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CD58P19256 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CD58P19256 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.66■■□□□ 1.06
CD58P19256 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.66■■□□□ 1.06
CD58P19256 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD58P19256 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CD58P19256 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CD58P19256 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD58P19256 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.65■■□□□ 1.06
CD58P19256 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD58P19256 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.65■■□□□ 1.06
CD58P19256 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.65■■□□□ 1.06
CD58P19256 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.65■■□□□ 1.06
CD58P19256 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CD58P19256 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.65■■□□□ 1.06
CD58P19256 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD58P19256 SMG8-203ENST00000578922 2178 ntBASIC21.65■■□□□ 1.06
CD58P19256 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CD58P19256 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
CD58P19256 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CD58P19256 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CD58P19256 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.64■■□□□ 1.06
CD58P19256 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.64■■□□□ 1.06
CD58P19256 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CD58P19256 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CD58P19256 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD58P19256 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD58P19256 DPP3P2-201ENST00000416030 1696 ntBASIC21.64■■□□□ 1.05
CD58P19256 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD58P19256 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CD58P19256 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CD58P19256 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.64■■□□□ 1.05
CD58P19256 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.64■■□□□ 1.05
CD58P19256 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.64■■□□□ 1.05
CD58P19256 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.64■■□□□ 1.05
CD58P19256 AC142086.2-201ENST00000569753 217 ntBASIC21.64■■□□□ 1.05
CD58P19256 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD58P19256 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD58P19256 GABARAPL3-202ENST00000624044 1851 ntBASIC21.64■■□□□ 1.05
CD58P19256 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CD58P19256 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CD58P19256 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.63■■□□□ 1.05
CD58P19256 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.63■■□□□ 1.05
CD58P19256 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.63■■□□□ 1.05
CD58P19256 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD58P19256 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD58P19256 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CD58P19256 AC091874.3-201ENST00000512672 1195 ntBASIC21.63■■□□□ 1.05
CD58P19256 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD58P19256 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD58P19256 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.63■■□□□ 1.05
CD58P19256 C2orf69P4-201ENST00000565394 541 ntBASIC21.63■■□□□ 1.05
CD58P19256 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.63■■□□□ 1.05
CD58P19256 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.63■■□□□ 1.05
CD58P19256 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.63■■□□□ 1.05
CD58P19256 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD58P19256 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.63■■□□□ 1.05
CD58P19256 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CD58P19256 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CD58P19256 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.63■■□□□ 1.05
CD58P19256 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CD58P19256 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.62■■□□□ 1.05
CD58P19256 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CD58P19256 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.62■■□□□ 1.05
CD58P19256 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.62■■□□□ 1.05
CD58P19256 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 AC069152.1-201ENST00000438030 544 ntBASIC21.62■■□□□ 1.05
CD58P19256 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CD58P19256 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.62■■□□□ 1.05
CD58P19256 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.62■■□□□ 1.05
CD58P19256 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.62■■□□□ 1.05
CD58P19256 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.62■■□□□ 1.05
CD58P19256 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.62■■□□□ 1.05
CD58P19256 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.62■■□□□ 1.05
CD58P19256 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.62■■□□□ 1.05
CD58P19256 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CD58P19256 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CD58P19256 AL512408.1-201ENST00000569378 2000 ntBASIC21.62■■□□□ 1.05
CD58P19256 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD58P19256 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD58P19256 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD58P19256 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD58P19256 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.61■■□□□ 1.05
CD58P19256 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CD58P19256 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD58P19256 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD58P19256 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CD58P19256 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CD58P19256 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms