Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.78■□□□□ 0.92
ERCC2P18074 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.78■□□□□ 0.92
ERCC2P18074 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.78■□□□□ 0.92
ERCC2P18074 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.78■□□□□ 0.92
ERCC2P18074 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ERCC2P18074 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ERCC2P18074 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.78■□□□□ 0.92
ERCC2P18074 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC2P18074 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC2P18074 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.78■□□□□ 0.92
ERCC2P18074 AL391422.3-201ENST00000603791 2761 ntBASIC20.78■□□□□ 0.92
ERCC2P18074 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC2P18074 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC2P18074 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERCC2P18074 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ERCC2P18074 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.77■□□□□ 0.92
ERCC2P18074 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ERCC2P18074 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ERCC2P18074 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.77■□□□□ 0.92
ERCC2P18074 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.77■□□□□ 0.92
ERCC2P18074 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.77■□□□□ 0.92
ERCC2P18074 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.77■□□□□ 0.92
ERCC2P18074 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ERCC2P18074 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.77■□□□□ 0.92
ERCC2P18074 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ERCC2P18074 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.77■□□□□ 0.92
ERCC2P18074 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERCC2P18074 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.77■□□□□ 0.91
ERCC2P18074 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ERCC2P18074 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC2P18074 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.76■□□□□ 0.91
ERCC2P18074 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC2P18074 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.76■□□□□ 0.91
ERCC2P18074 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
ERCC2P18074 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
ERCC2P18074 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.76■□□□□ 0.91
ERCC2P18074 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC2P18074 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC2P18074 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC2P18074 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.76■□□□□ 0.91
ERCC2P18074 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ERCC2P18074 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.76■□□□□ 0.91
ERCC2P18074 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.76■□□□□ 0.91
ERCC2P18074 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.76■□□□□ 0.91
ERCC2P18074 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ERCC2P18074 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.76■□□□□ 0.91
ERCC2P18074 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.76■□□□□ 0.91
ERCC2P18074 AC104771.1-201ENST00000603335 964 ntBASIC20.76■□□□□ 0.91
ERCC2P18074 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
ERCC2P18074 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC2P18074 AC092118.2-201ENST00000613495 667 ntBASIC20.76■□□□□ 0.91
ERCC2P18074 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.76■□□□□ 0.91
ERCC2P18074 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
ERCC2P18074 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC2P18074 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERCC2P18074 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.76■□□□□ 0.91
ERCC2P18074 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC2P18074 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC2P18074 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC2P18074 PTBP1P-201ENST00000554374 1601 ntBASIC20.75■□□□□ 0.91
ERCC2P18074 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC2P18074 AC099778.1-201ENST00000568593 1911 ntBASIC20.75■□□□□ 0.91
ERCC2P18074 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.75■□□□□ 0.91
ERCC2P18074 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ERCC2P18074 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.75■□□□□ 0.91
ERCC2P18074 AL138781.1-201ENST00000566567 1274 ntBASIC20.75■□□□□ 0.91
ERCC2P18074 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.75■□□□□ 0.91
ERCC2P18074 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.75■□□□□ 0.91
ERCC2P18074 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ERCC2P18074 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC2P18074 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.75■□□□□ 0.91
ERCC2P18074 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.75■□□□□ 0.91
ERCC2P18074 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC2P18074 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERCC2P18074 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ERCC2P18074 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ERCC2P18074 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.74■□□□□ 0.91
ERCC2P18074 DUSP5P2-201ENST00000426873 1033 ntBASIC20.74■□□□□ 0.91
ERCC2P18074 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.74■□□□□ 0.91
ERCC2P18074 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.74■□□□□ 0.91
ERCC2P18074 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ERCC2P18074 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERCC2P18074 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.73■□□□□ 0.91
ERCC2P18074 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms