Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBL4AP11441 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBL4AP11441 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL4AP11441 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL4AP11441 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.62■□□□□ 0.57
UBL4AP11441 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
UBL4AP11441 CDCA4P2-201ENST00000441182 718 ntBASIC18.62■□□□□ 0.57
UBL4AP11441 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.62■□□□□ 0.57
UBL4AP11441 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.62■□□□□ 0.57
UBL4AP11441 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL4AP11441 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBL4AP11441 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
UBL4AP11441 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.62■□□□□ 0.57
UBL4AP11441 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.62■□□□□ 0.57
UBL4AP11441 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
UBL4AP11441 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.61■□□□□ 0.57
UBL4AP11441 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.61■□□□□ 0.57
UBL4AP11441 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.61■□□□□ 0.57
UBL4AP11441 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.61■□□□□ 0.57
UBL4AP11441 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
UBL4AP11441 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.61■□□□□ 0.57
UBL4AP11441 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
UBL4AP11441 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.61■□□□□ 0.57
UBL4AP11441 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.61■□□□□ 0.57
UBL4AP11441 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.61■□□□□ 0.57
UBL4AP11441 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 AC026185.1-201ENST00000445748 174 ntBASIC18.61■□□□□ 0.57
UBL4AP11441 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
UBL4AP11441 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.61■□□□□ 0.57
UBL4AP11441 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
UBL4AP11441 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
UBL4AP11441 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.6■□□□□ 0.57
UBL4AP11441 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBL4AP11441 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.6■□□□□ 0.57
UBL4AP11441 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
UBL4AP11441 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
UBL4AP11441 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
UBL4AP11441 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.59■□□□□ 0.57
UBL4AP11441 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.59■□□□□ 0.57
UBL4AP11441 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBL4AP11441 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 MIR663A-201ENST00000385250 93 ntBASIC18.59■□□□□ 0.57
UBL4AP11441 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.59■□□□□ 0.57
UBL4AP11441 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.59■□□□□ 0.57
UBL4AP11441 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.59■□□□□ 0.57
UBL4AP11441 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
UBL4AP11441 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.59■□□□□ 0.57
UBL4AP11441 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.59■□□□□ 0.57
UBL4AP11441 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.59■□□□□ 0.57
UBL4AP11441 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.59■□□□□ 0.57
UBL4AP11441 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.59■□□□□ 0.57
UBL4AP11441 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBL4AP11441 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
UBL4AP11441 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
UBL4AP11441 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBL4AP11441 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
UBL4AP11441 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.58■□□□□ 0.57
UBL4AP11441 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
UBL4AP11441 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL4AP11441 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBL4AP11441 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms