Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.93■■□□□ 1.26
HOXC6P09630 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
HOXC6P09630 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.92■■□□□ 1.26
HOXC6P09630 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
HOXC6P09630 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.92■■□□□ 1.26
HOXC6P09630 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.92■■□□□ 1.26
HOXC6P09630 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.92■■□□□ 1.26
HOXC6P09630 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.92■■□□□ 1.26
HOXC6P09630 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.92■■□□□ 1.26
HOXC6P09630 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
HOXC6P09630 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
HOXC6P09630 AC124283.5-201ENST00000624661 1809 ntBASIC22.92■■□□□ 1.26
HOXC6P09630 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 KRT8P36-201ENST00000489121 1440 ntBASIC22.91■■□□□ 1.26
HOXC6P09630 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
HOXC6P09630 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.91■■□□□ 1.26
HOXC6P09630 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
HOXC6P09630 AL121906.2-201ENST00000621597 723 ntBASIC22.91■■□□□ 1.26
HOXC6P09630 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
HOXC6P09630 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
HOXC6P09630 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
HOXC6P09630 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
HOXC6P09630 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HOXC6P09630 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HOXC6P09630 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
HOXC6P09630 RBM17P1-201ENST00000453646 1190 ntBASIC22.9■■□□□ 1.26
HOXC6P09630 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.9■■□□□ 1.26
HOXC6P09630 AC092865.7-201ENST00000641832 219 ntBASIC22.9■■□□□ 1.26
HOXC6P09630 AC027702.1-201ENST00000563810 1770 ntBASIC22.9■■□□□ 1.26
HOXC6P09630 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.9■■□□□ 1.26
HOXC6P09630 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.9■■□□□ 1.26
HOXC6P09630 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HOXC6P09630 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
HOXC6P09630 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.9■■□□□ 1.26
HOXC6P09630 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
HOXC6P09630 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
HOXC6P09630 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
HOXC6P09630 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.89■■□□□ 1.26
HOXC6P09630 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
HOXC6P09630 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
HOXC6P09630 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
HOXC6P09630 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HOXC6P09630 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
HOXC6P09630 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
HOXC6P09630 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HOXC6P09630 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.89■■□□□ 1.25
HOXC6P09630 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.89■■□□□ 1.25
HOXC6P09630 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HOXC6P09630 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
HOXC6P09630 NUDT16P1-203ENST00000513809 620 ntBASIC22.89■■□□□ 1.25
HOXC6P09630 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.89■■□□□ 1.25
HOXC6P09630 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.89■■□□□ 1.25
HOXC6P09630 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.89■■□□□ 1.25
HOXC6P09630 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.89■■□□□ 1.25
HOXC6P09630 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.89■■□□□ 1.25
HOXC6P09630 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.89■■□□□ 1.25
HOXC6P09630 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
HOXC6P09630 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
HOXC6P09630 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
HOXC6P09630 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HOXC6P09630 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.88■■□□□ 1.25
HOXC6P09630 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
HOXC6P09630 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
HOXC6P09630 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.88■■□□□ 1.25
HOXC6P09630 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
HOXC6P09630 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HOXC6P09630 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.88■■□□□ 1.25
HOXC6P09630 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.88■■□□□ 1.25
HOXC6P09630 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.88■■□□□ 1.25
HOXC6P09630 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
HOXC6P09630 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.88■■□□□ 1.25
HOXC6P09630 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
HOXC6P09630 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.87■■□□□ 1.25
HOXC6P09630 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.87■■□□□ 1.25
HOXC6P09630 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HOXC6P09630 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HOXC6P09630 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HOXC6P09630 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HOXC6P09630 KRT18P35-201ENST00000510488 1269 ntBASIC22.87■■□□□ 1.25
HOXC6P09630 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.87■■□□□ 1.25
HOXC6P09630 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.87■■□□□ 1.25
HOXC6P09630 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.87■■□□□ 1.25
HOXC6P09630 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HOXC6P09630 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
HOXC6P09630 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.86■■□□□ 1.25
HOXC6P09630 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
HOXC6P09630 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
HOXC6P09630 AC079598.2-202ENST00000546624 1451 ntBASIC22.86■■□□□ 1.25
HOXC6P09630 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.86■■□□□ 1.25
HOXC6P09630 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.86■■□□□ 1.25
HOXC6P09630 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.86■■□□□ 1.25
HOXC6P09630 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.86■■□□□ 1.25
HOXC6P09630 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms