Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DPB1P04440 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 AC097381.1-201ENST00000429019 1296 ntBASIC18.07■□□□□ 0.48
HLA-DPB1P04440 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 AC087623.3-201ENST00000607047 1098 ntBASIC18.07■□□□□ 0.48
HLA-DPB1P04440 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HLA-DPB1P04440 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DPB1P04440 AC125437.2-201ENST00000625180 2167 ntBASIC18.06■□□□□ 0.48
HLA-DPB1P04440 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 AL158211.5-201ENST00000623583 2518 ntBASIC18.05■□□□□ 0.48
HLA-DPB1P04440 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 RARRES2P6-201ENST00000567333 442 ntBASIC18.05■□□□□ 0.48
HLA-DPB1P04440 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 MIR6821-201ENST00000617625 74 ntBASIC18.05■□□□□ 0.48
HLA-DPB1P04440 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 AP000974.1-201ENST00000623909 2387 ntBASIC18.05■□□□□ 0.48
HLA-DPB1P04440 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DPB1P04440 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 KRT87P-202ENST00000534226 1464 ntBASIC18.04■□□□□ 0.48
HLA-DPB1P04440 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 DUX4L2-201ENST00000561772 1275 ntBASIC18.04■□□□□ 0.48
HLA-DPB1P04440 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DPB1P04440 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms