Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD3DP04234 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.09■□□□□ 0.33
CD3DP04234 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CD3DP04234 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.09■□□□□ 0.33
CD3DP04234 EEF1DP3-203ENST00000566025 782 ntBASIC17.09■□□□□ 0.33
CD3DP04234 AC053503.5-201ENST00000601508 636 ntBASIC17.09■□□□□ 0.33
CD3DP04234 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD3DP04234 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.09■□□□□ 0.33
CD3DP04234 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CD3DP04234 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD3DP04234 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD3DP04234 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
CD3DP04234 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD3DP04234 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD3DP04234 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD3DP04234 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
CD3DP04234 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD3DP04234 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CD3DP04234 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.08■□□□□ 0.33
CD3DP04234 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.08■□□□□ 0.33
CD3DP04234 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CD3DP04234 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
CD3DP04234 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD3DP04234 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD3DP04234 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD3DP04234 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CD3DP04234 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CD3DP04234 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD3DP04234 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.08■□□□□ 0.32
CD3DP04234 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.08■□□□□ 0.32
CD3DP04234 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CD3DP04234 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD3DP04234 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD3DP04234 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.08■□□□□ 0.32
CD3DP04234 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.08■□□□□ 0.32
CD3DP04234 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.07■□□□□ 0.32
CD3DP04234 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CD3DP04234 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CD3DP04234 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD3DP04234 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.07■□□□□ 0.32
CD3DP04234 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.06■□□□□ 0.32
CD3DP04234 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.06■□□□□ 0.32
CD3DP04234 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CD3DP04234 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CD3DP04234 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD3DP04234 Z82202.1-201ENST00000623446 1880 ntBASIC17.06■□□□□ 0.32
CD3DP04234 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CD3DP04234 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.06■□□□□ 0.32
CD3DP04234 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CD3DP04234 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.06■□□□□ 0.32
CD3DP04234 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 BX842568.3-201ENST00000418104 571 ntBASIC17.06■□□□□ 0.32
CD3DP04234 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CD3DP04234 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD3DP04234 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.05■□□□□ 0.32
CD3DP04234 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CD3DP04234 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.05■□□□□ 0.32
CD3DP04234 DPP3P2-201ENST00000416030 1696 ntBASIC17.05■□□□□ 0.32
CD3DP04234 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD3DP04234 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD3DP04234 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.05■□□□□ 0.32
CD3DP04234 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.05■□□□□ 0.32
CD3DP04234 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.05■□□□□ 0.32
CD3DP04234 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.05■□□□□ 0.32
CD3DP04234 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CD3DP04234 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD3DP04234 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD3DP04234 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms