Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MT-ND3P03897 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
MT-ND3P03897 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND3P03897 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
MT-ND3P03897 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND3P03897 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND3P03897 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND3P03897 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND3P03897 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MT-ND3P03897 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.48■□□□□ 0.87
MT-ND3P03897 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.48■□□□□ 0.87
MT-ND3P03897 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.48■□□□□ 0.87
MT-ND3P03897 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND3P03897 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
MT-ND3P03897 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-ND3P03897 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND3P03897 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.48■□□□□ 0.87
MT-ND3P03897 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MT-ND3P03897 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MT-ND3P03897 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND3P03897 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND3P03897 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND3P03897 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.47■□□□□ 0.87
MT-ND3P03897 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
MT-ND3P03897 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.47■□□□□ 0.87
MT-ND3P03897 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND3P03897 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
MT-ND3P03897 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.47■□□□□ 0.87
MT-ND3P03897 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MT-ND3P03897 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.47■□□□□ 0.87
MT-ND3P03897 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
MT-ND3P03897 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.46■□□□□ 0.87
MT-ND3P03897 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.46■□□□□ 0.87
MT-ND3P03897 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.46■□□□□ 0.87
MT-ND3P03897 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
MT-ND3P03897 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 AC026185.1-201ENST00000445748 174 ntBASIC20.46■□□□□ 0.87
MT-ND3P03897 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.46■□□□□ 0.87
MT-ND3P03897 AC008175.2-201ENST00000612840 297 ntBASIC20.46■□□□□ 0.87
MT-ND3P03897 AC073111.5-205ENST00000641717 521 ntBASIC20.46■□□□□ 0.87
MT-ND3P03897 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
MT-ND3P03897 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.46■□□□□ 0.87
MT-ND3P03897 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
MT-ND3P03897 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.46■□□□□ 0.87
MT-ND3P03897 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MT-ND3P03897 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MT-ND3P03897 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MT-ND3P03897 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MT-ND3P03897 SMG8-203ENST00000578922 2178 ntBASIC20.45■□□□□ 0.86
MT-ND3P03897 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-ND3P03897 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-ND3P03897 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-ND3P03897 POU5F1P4-201ENST00000413175 1085 ntBASIC20.45■□□□□ 0.86
MT-ND3P03897 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-ND3P03897 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-ND3P03897 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.45■□□□□ 0.86
MT-ND3P03897 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.45■□□□□ 0.86
MT-ND3P03897 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MT-ND3P03897 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.45■□□□□ 0.86
MT-ND3P03897 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MT-ND3P03897 AC087289.5-201ENST00000586076 3175 ntBASIC20.44■□□□□ 0.86
MT-ND3P03897 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MT-ND3P03897 KRT87P-202ENST00000534226 1464 ntBASIC20.44■□□□□ 0.86
MT-ND3P03897 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MT-ND3P03897 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 CDCA4P2-201ENST00000441182 718 ntBASIC20.44■□□□□ 0.86
MT-ND3P03897 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.44■□□□□ 0.86
MT-ND3P03897 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.44■□□□□ 0.86
MT-ND3P03897 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.44■□□□□ 0.86
MT-ND3P03897 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.44■□□□□ 0.86
MT-ND3P03897 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.44■□□□□ 0.86
MT-ND3P03897 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
MT-ND3P03897 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms