Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
TOMM40O96008 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.76■□□□□ 0.11
TOMM40O96008 KRT19P1-201ENST00000405746 1186 ntBASIC15.76■□□□□ 0.11
TOMM40O96008 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.76■□□□□ 0.11
TOMM40O96008 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TOMM40O96008 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.76■□□□□ 0.11
TOMM40O96008 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.76■□□□□ 0.11
TOMM40O96008 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.76■□□□□ 0.11
TOMM40O96008 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.76■□□□□ 0.11
TOMM40O96008 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TOMM40O96008 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.76■□□□□ 0.11
TOMM40O96008 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.76■□□□□ 0.11
TOMM40O96008 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TOMM40O96008 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TOMM40O96008 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.75■□□□□ 0.11
TOMM40O96008 AC019069.1-201ENST00000610008 1333 ntBASIC15.75■□□□□ 0.11
TOMM40O96008 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TOMM40O96008 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.75■□□□□ 0.11
TOMM40O96008 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
TOMM40O96008 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.75■□□□□ 0.11
TOMM40O96008 CDV3P1-201ENST00000471403 739 ntBASIC15.75■□□□□ 0.11
TOMM40O96008 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.75■□□□□ 0.11
TOMM40O96008 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.75■□□□□ 0.11
TOMM40O96008 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TOMM40O96008 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.75■□□□□ 0.11
TOMM40O96008 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 KRT8P36-201ENST00000489121 1440 ntBASIC15.75■□□□□ 0.11
TOMM40O96008 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TOMM40O96008 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TOMM40O96008 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 AC112907.3-201ENST00000577781 2400 ntBASIC15.74■□□□□ 0.11
TOMM40O96008 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.74■□□□□ 0.11
TOMM40O96008 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.74■□□□□ 0.11
TOMM40O96008 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
TOMM40O96008 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.74■□□□□ 0.11
TOMM40O96008 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.74■□□□□ 0.11
TOMM40O96008 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.74■□□□□ 0.11
TOMM40O96008 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.74■□□□□ 0.11
TOMM40O96008 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.74■□□□□ 0.11
TOMM40O96008 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.74■□□□□ 0.11
TOMM40O96008 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.74■□□□□ 0.11
TOMM40O96008 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TOMM40O96008 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 TCF3P1-201ENST00000423021 1937 ntBASIC15.73■□□□□ 0.11
TOMM40O96008 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.73■□□□□ 0.11
TOMM40O96008 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.73■□□□□ 0.11
TOMM40O96008 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.73■□□□□ 0.11
TOMM40O96008 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TOMM40O96008 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TOMM40O96008 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TOMM40O96008 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.72■□□□□ 0.11
TOMM40O96008 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms