Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.18■□□□□ 0.98
TRUB2O95900 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRUB2O95900 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.18■□□□□ 0.98
TRUB2O95900 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRUB2O95900 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRUB2O95900 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRUB2O95900 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.18■□□□□ 0.98
TRUB2O95900 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRUB2O95900 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRUB2O95900 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRUB2O95900 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRUB2O95900 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRUB2O95900 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.17■□□□□ 0.98
TRUB2O95900 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.17■□□□□ 0.98
TRUB2O95900 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.17■□□□□ 0.98
TRUB2O95900 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRUB2O95900 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.17■□□□□ 0.98
TRUB2O95900 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRUB2O95900 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.17■□□□□ 0.98
TRUB2O95900 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
TRUB2O95900 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.17■□□□□ 0.98
TRUB2O95900 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRUB2O95900 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRUB2O95900 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.16■□□□□ 0.98
TRUB2O95900 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.16■□□□□ 0.98
TRUB2O95900 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.16■□□□□ 0.98
TRUB2O95900 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.16■□□□□ 0.98
TRUB2O95900 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRUB2O95900 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.16■□□□□ 0.98
TRUB2O95900 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.16■□□□□ 0.98
TRUB2O95900 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.16■□□□□ 0.98
TRUB2O95900 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.16■□□□□ 0.98
TRUB2O95900 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.16■□□□□ 0.98
TRUB2O95900 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.16■□□□□ 0.98
TRUB2O95900 MYC-209ENST00000641252 345 ntBASIC21.16■□□□□ 0.98
TRUB2O95900 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.16■□□□□ 0.98
TRUB2O95900 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.16■□□□□ 0.98
TRUB2O95900 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRUB2O95900 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRUB2O95900 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.15■□□□□ 0.98
TRUB2O95900 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.15■□□□□ 0.98
TRUB2O95900 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.15■□□□□ 0.98
TRUB2O95900 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.15■□□□□ 0.98
TRUB2O95900 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.15■□□□□ 0.98
TRUB2O95900 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.15■□□□□ 0.98
TRUB2O95900 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.15■□□□□ 0.98
TRUB2O95900 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.15■□□□□ 0.98
TRUB2O95900 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRUB2O95900 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.15■□□□□ 0.98
TRUB2O95900 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRUB2O95900 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRUB2O95900 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRUB2O95900 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRUB2O95900 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.14■□□□□ 0.98
TRUB2O95900 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRUB2O95900 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRUB2O95900 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRUB2O95900 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRUB2O95900 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRUB2O95900 AC097658.1-201ENST00000475555 843 ntBASIC21.14■□□□□ 0.97
TRUB2O95900 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.14■□□□□ 0.97
TRUB2O95900 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRUB2O95900 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRUB2O95900 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRUB2O95900 SLC25A24-204ENST00000569674 2357 ntBASIC21.14■□□□□ 0.97
TRUB2O95900 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 SMG8-203ENST00000578922 2178 ntBASIC21.13■□□□□ 0.97
TRUB2O95900 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRUB2O95900 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.13■□□□□ 0.97
TRUB2O95900 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.13■□□□□ 0.97
TRUB2O95900 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.13■□□□□ 0.97
TRUB2O95900 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 C2orf69P4-201ENST00000565394 541 ntBASIC21.13■□□□□ 0.97
TRUB2O95900 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 AC099778.1-201ENST00000568593 1911 ntBASIC21.13■□□□□ 0.97
TRUB2O95900 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRUB2O95900 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.13■□□□□ 0.97
TRUB2O95900 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRUB2O95900 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.12■□□□□ 0.97
TRUB2O95900 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TRUB2O95900 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRUB2O95900 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms