Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLN5O75503 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLN5O75503 AL356309.3-201ENST00000624132 1934 ntBASIC16.39■□□□□ 0.21
CLN5O75503 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLN5O75503 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLN5O75503 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLN5O75503 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.39■□□□□ 0.21
CLN5O75503 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.39■□□□□ 0.21
CLN5O75503 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.39■□□□□ 0.21
CLN5O75503 AP001330.3-201ENST00000520123 633 ntBASIC16.39■□□□□ 0.21
CLN5O75503 AL355001.2-201ENST00000620617 1191 ntBASIC16.39■□□□□ 0.21
CLN5O75503 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLN5O75503 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLN5O75503 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLN5O75503 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.39■□□□□ 0.21
CLN5O75503 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLN5O75503 AC005224.4-201ENST00000583262 1652 ntBASIC16.39■□□□□ 0.21
CLN5O75503 BX005040.4-201ENST00000637145 1518 ntBASIC16.39■□□□□ 0.21
CLN5O75503 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLN5O75503 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLN5O75503 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLN5O75503 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLN5O75503 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.38■□□□□ 0.21
CLN5O75503 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
CLN5O75503 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CLN5O75503 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLN5O75503 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.38■□□□□ 0.21
CLN5O75503 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.38■□□□□ 0.21
CLN5O75503 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.38■□□□□ 0.21
CLN5O75503 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLN5O75503 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.38■□□□□ 0.21
CLN5O75503 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 RASA4CP-201ENST00000424092 1398 ntBASIC16.38■□□□□ 0.21
CLN5O75503 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLN5O75503 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLN5O75503 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLN5O75503 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLN5O75503 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.37■□□□□ 0.21
CLN5O75503 AC006128.1-201ENST00000624704 1661 ntBASIC16.37■□□□□ 0.21
CLN5O75503 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLN5O75503 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 MIR572-201ENST00000384983 95 ntBASIC16.37■□□□□ 0.21
CLN5O75503 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.37■□□□□ 0.21
CLN5O75503 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.37■□□□□ 0.21
CLN5O75503 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.37■□□□□ 0.21
CLN5O75503 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.37■□□□□ 0.21
CLN5O75503 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 AP000974.1-201ENST00000623909 2387 ntBASIC16.37■□□□□ 0.21
CLN5O75503 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.37■□□□□ 0.21
CLN5O75503 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLN5O75503 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.36■□□□□ 0.21
CLN5O75503 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLN5O75503 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.36■□□□□ 0.21
CLN5O75503 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.36■□□□□ 0.21
CLN5O75503 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLN5O75503 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
CLN5O75503 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.36■□□□□ 0.21
CLN5O75503 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLN5O75503 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.36■□□□□ 0.21
CLN5O75503 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.36■□□□□ 0.21
CLN5O75503 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.36■□□□□ 0.21
CLN5O75503 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLN5O75503 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLN5O75503 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms