Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA3O60609 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.79■□□□□ 0.76
GFRA3O60609 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA3O60609 AC138932.3-201ENST00000567634 1902 ntBASIC19.78■□□□□ 0.76
GFRA3O60609 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA3O60609 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.78■□□□□ 0.76
GFRA3O60609 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA3O60609 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA3O60609 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA3O60609 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA3O60609 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA3O60609 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA3O60609 CKBP1-201ENST00000565489 1086 ntBASIC19.78■□□□□ 0.76
GFRA3O60609 AC026271.3-201ENST00000571884 352 ntBASIC19.78■□□□□ 0.76
GFRA3O60609 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
GFRA3O60609 MIR3652-201ENST00000579335 131 ntBASIC19.78■□□□□ 0.76
GFRA3O60609 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
GFRA3O60609 AL031432.5-201ENST00000641059 760 ntBASIC19.78■□□□□ 0.76
GFRA3O60609 AC116562.4-202ENST00000641738 218 ntBASIC19.78■□□□□ 0.76
GFRA3O60609 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.78■□□□□ 0.76
GFRA3O60609 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA3O60609 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.77■□□□□ 0.76
GFRA3O60609 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA3O60609 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA3O60609 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.77■□□□□ 0.76
GFRA3O60609 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA3O60609 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.77■□□□□ 0.76
GFRA3O60609 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.77■□□□□ 0.76
GFRA3O60609 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GFRA3O60609 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
GFRA3O60609 AC141257.4-201ENST00000634557 245 ntBASIC19.77■□□□□ 0.76
GFRA3O60609 AC136944.6-201ENST00000634818 245 ntBASIC19.77■□□□□ 0.76
GFRA3O60609 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
GFRA3O60609 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.77■□□□□ 0.75
GFRA3O60609 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
GFRA3O60609 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.76■□□□□ 0.75
GFRA3O60609 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.76■□□□□ 0.75
GFRA3O60609 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
GFRA3O60609 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GFRA3O60609 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.76■□□□□ 0.75
GFRA3O60609 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.76■□□□□ 0.75
GFRA3O60609 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.76■□□□□ 0.75
GFRA3O60609 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.76■□□□□ 0.75
GFRA3O60609 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GFRA3O60609 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.75■□□□□ 0.75
GFRA3O60609 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA3O60609 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA3O60609 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.75■□□□□ 0.75
GFRA3O60609 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.75■□□□□ 0.75
GFRA3O60609 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA3O60609 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.75■□□□□ 0.75
GFRA3O60609 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.75■□□□□ 0.75
GFRA3O60609 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA3O60609 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.75■□□□□ 0.75
GFRA3O60609 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
GFRA3O60609 B3GAT3P1-201ENST00000471720 806 ntBASIC19.75■□□□□ 0.75
GFRA3O60609 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA3O60609 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.75■□□□□ 0.75
GFRA3O60609 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
GFRA3O60609 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA3O60609 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.75■□□□□ 0.75
GFRA3O60609 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA3O60609 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GFRA3O60609 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA3O60609 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GFRA3O60609 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA3O60609 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GFRA3O60609 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA3O60609 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA3O60609 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA3O60609 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.74■□□□□ 0.75
GFRA3O60609 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.74■□□□□ 0.75
GFRA3O60609 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.74■□□□□ 0.75
GFRA3O60609 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.74■□□□□ 0.75
GFRA3O60609 AL136038.3-201ENST00000561909 1096 ntBASIC19.74■□□□□ 0.75
GFRA3O60609 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
GFRA3O60609 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
GFRA3O60609 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA3O60609 AC004812.2-201ENST00000611079 2094 ntBASIC19.74■□□□□ 0.75
GFRA3O60609 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.74■□□□□ 0.75
GFRA3O60609 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GFRA3O60609 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GFRA3O60609 AC137767.1-201ENST00000602918 1920 ntBASIC19.73■□□□□ 0.75
GFRA3O60609 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms