Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TNFRSF11BO00300 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 AL691432.2-201ENST00000607222 2038 ntBASIC18.62■□□□□ 0.57
TNFRSF11BO00300 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF11BO00300 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 KRT8P36-201ENST00000489121 1440 ntBASIC18.61■□□□□ 0.57
TNFRSF11BO00300 AC008406.3-201ENST00000620001 1374 ntBASIC18.61■□□□□ 0.57
TNFRSF11BO00300 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 AC010141.2-201ENST00000452426 721 ntBASIC18.61■□□□□ 0.57
TNFRSF11BO00300 AC131212.1-201ENST00000613771 668 ntBASIC18.61■□□□□ 0.57
TNFRSF11BO00300 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFRSF11BO00300 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 AL358852.1-201ENST00000623174 1268 ntBASIC18.6■□□□□ 0.57
TNFRSF11BO00300 AL136967.2-201ENST00000623968 743 ntBASIC18.6■□□□□ 0.57
TNFRSF11BO00300 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFRSF11BO00300 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 SLC7A5P2-201ENST00000553010 536 ntBASIC18.59■□□□□ 0.57
TNFRSF11BO00300 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 BX119927.1-201ENST00000636596 1552 ntBASIC18.59■□□□□ 0.57
TNFRSF11BO00300 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFRSF11BO00300 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFRSF11BO00300 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TNFRSF11BO00300 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TNFRSF11BO00300 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFRSF11BO00300 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms