Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC007322.3-201ENST00000426526 701 ntBASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 AL139246.5-201ENST00000606645 996 ntBASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 BX119927.1-201ENST00000636596 1552 ntBASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRIM49D1C9J1S8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 TMEM179-206ENST00000616017 1645 ntBASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 AC243732.1-201ENST00000612648 864 ntBASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 RBM17P2-201ENST00000616397 1405 ntBASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM49D1C9J1S8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 KRT18P20-201ENST00000548986 1279 ntBASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 AC018445.3-201ENST00000624177 1945 ntBASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49D1C9J1S8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 AC105265.2-201ENST00000467189 838 ntBASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM49D1C9J1S8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 FAM21FP-204ENST00000608637 956 ntBASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM49D1C9J1S8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM49D1C9J1S8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms