Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRRM4A7MD48 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SRRM4A7MD48 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRRM4A7MD48 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRRM4A7MD48 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRRM4A7MD48 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 MIR5787-201ENST00000611784 55 ntBASIC16.24■□□□□ 0.19
SRRM4A7MD48 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRRM4A7MD48 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRRM4A7MD48 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SRRM4A7MD48 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SRRM4A7MD48 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 PGM5P4-201ENST00000421970 445 ntBASIC16.23■□□□□ 0.19
SRRM4A7MD48 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 RARRES2P4-201ENST00000514074 484 ntBASIC16.23■□□□□ 0.19
SRRM4A7MD48 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.23■□□□□ 0.19
SRRM4A7MD48 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SRRM4A7MD48 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.22■□□□□ 0.19
SRRM4A7MD48 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SRRM4A7MD48 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SRRM4A7MD48 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.21■□□□□ 0.19
SRRM4A7MD48 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SRRM4A7MD48 AC022517.1-201ENST00000592429 346 ntBASIC16.21■□□□□ 0.19
SRRM4A7MD48 BID-214ENST00000617586 542 ntTSL 5 BASIC16.21■□□□□ 0.19
SRRM4A7MD48 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SRRM4A7MD48 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SRRM4A7MD48 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SRRM4A7MD48 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRRM4A7MD48 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.21■□□□□ 0.19
SRRM4A7MD48 AL691432.2-201ENST00000607222 2038 ntBASIC16.21■□□□□ 0.18
SRRM4A7MD48 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRRM4A7MD48 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms