Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 AL512625.2-201ENST00000417533 625 ntBASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 AC133552.2-202ENST00000575694 574 ntBASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 AC092666.2-201ENST00000613287 246 ntBASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC162PA2VCL2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 AC105020.6-201ENST00000621523 1217 ntBASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 AC112907.3-201ENST00000577781 2400 ntBASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC162PA2VCL2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC162PA2VCL2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 AC105036.2-201ENST00000569468 176 ntBASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 KRT17P1-201ENST00000399211 1546 ntBASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC162PA2VCL2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 PCDHAC2-203ENST00000615316 3011 ntBASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 AF201337.1-201ENST00000520239 748 ntBASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC162PA2VCL2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC162PA2VCL2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CCDC162PA2VCL2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCDC162PA2VCL2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms