Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 KRT19P1-201ENST00000405746 1186 ntBASIC20.11■□□□□ 0.81
CCDC189A1A4V9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 SLC7A5P2-201ENST00000553010 536 ntBASIC20.11■□□□□ 0.81
CCDC189A1A4V9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC189A1A4V9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 AL512408.1-201ENST00000569378 2000 ntBASIC20.1■□□□□ 0.81
CCDC189A1A4V9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 RBM17P2-201ENST00000616397 1405 ntBASIC20.1■□□□□ 0.81
CCDC189A1A4V9 AC092720.2-201ENST00000602388 1665 ntBASIC20.1■□□□□ 0.81
CCDC189A1A4V9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC189A1A4V9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
CCDC189A1A4V9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 AC091799.1-201ENST00000422823 811 ntBASIC20.08■□□□□ 0.81
CCDC189A1A4V9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC189A1A4V9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC189A1A4V9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC189A1A4V9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC189A1A4V9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CCDC189A1A4V9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC189A1A4V9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC189A1A4V9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
CCDC189A1A4V9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC189A1A4V9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC189A1A4V9 AC112907.3-201ENST00000577781 2400 ntBASIC20.07■□□□□ 0.8
CCDC189A1A4V9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC189A1A4V9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC189A1A4V9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms