Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV34A0A0B4J273 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 AC125437.2-201ENST00000625180 2167 ntBASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 AL138724.1-201ENST00000606771 1088 ntBASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV34A0A0B4J273 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 AP000974.1-201ENST00000623909 2387 ntBASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV34A0A0B4J273 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 AC055733.4-201ENST00000638462 1354 ntBASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 AL512631.2-201ENST00000604634 923 ntBASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 LTB4R2-202ENST00000528054 3092 ntBASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV34A0A0B4J273 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 BX323043.1-201ENST00000641006 1765 ntBASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV34A0A0B4J273 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms