Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 USP39-204ENST00000409766 2033 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 AC034268.1-201ENST00000441047 882 ntBASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 CDV3P1-201ENST00000471403 739 ntBASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 KRT18P61-201ENST00000585825 1298 ntBASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV12-3A0A0B4J271 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 AL162377.1-201ENST00000618844 1793 ntBASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 MYCNOS-205ENST00000641950 531 ntBASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 AC099778.1-201ENST00000568593 1911 ntBASIC14.98□□□□□ -0.01
TRAV12-3A0A0B4J271 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 SMG8-203ENST00000578922 2178 ntBASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 AFG3L1P-217ENST00000557444 2447 ntBASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV12-3A0A0B4J271 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV12-3A0A0B4J271 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms