Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
P04436 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC7.23□□□□□ -1.25
P04436 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
P04436 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
P04436 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.23□□□□□ -1.25
P04436 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
P04436 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
P04436 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
P04436 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
P04436 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.22□□□□□ -1.25
P04436 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
P04436 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
P04436 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.22□□□□□ -1.25
P04436 AC087203.2-201ENST00000526502 1587 ntBASIC7.22□□□□□ -1.25
P04436 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 RNA5SP301-201ENST00000362537 121 ntBASIC7.22□□□□□ -1.25
P04436 RNU1-11P-201ENST00000383975 164 ntBASIC7.22□□□□□ -1.25
P04436 SNORA10-201ENST00000384084 133 ntBASIC7.22□□□□□ -1.25
P04436 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
P04436 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 AL606752.1-201ENST00000435442 666 ntBASIC7.22□□□□□ -1.25
P04436 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 AC109454.1-201ENST00000471205 498 ntBASIC7.22□□□□□ -1.25
P04436 RN7SL314P-201ENST00000490735 292 ntBASIC7.22□□□□□ -1.25
P04436 AC127024.1-201ENST00000490847 418 ntBASIC7.22□□□□□ -1.25
P04436 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.22□□□□□ -1.25
P04436 AC138866.1-201ENST00000514522 497 ntBASIC7.22□□□□□ -1.25
P04436 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.22□□□□□ -1.25
P04436 IGHV7-40-201ENST00000520963 296 ntBASIC7.22□□□□□ -1.25
P04436 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.22□□□□□ -1.25
P04436 AC024257.1-201ENST00000547523 566 ntTSL 4 BASIC7.22□□□□□ -1.25
P04436 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC7.22□□□□□ -1.25
P04436 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 AC090607.2-201ENST00000560331 695 ntBASIC7.22□□□□□ -1.25
P04436 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC7.22□□□□□ -1.25
P04436 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 MIR4642-201ENST00000583943 82 ntBASIC7.22□□□□□ -1.25
P04436 AC010323.2-201ENST00000596405 594 ntBASIC7.22□□□□□ -1.25
P04436 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC7.22□□□□□ -1.25
P04436 AL021807.1-201ENST00000607175 565 ntBASIC7.22□□□□□ -1.25
P04436 AC000068.3-201ENST00000607934 427 ntBASIC7.22□□□□□ -1.25
P04436 AC016394.1-201ENST00000608444 833 ntBASIC7.22□□□□□ -1.25
P04436 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 AC005785.2-201ENST00000624655 631 ntBASIC7.22□□□□□ -1.25
P04436 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 AC009148.1-201ENST00000570148 2693 ntBASIC7.22□□□□□ -1.25
P04436 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.22□□□□□ -1.25
P04436 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
P04436 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
P04436 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
P04436 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.21□□□□□ -1.25
P04436 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.21□□□□□ -1.25
P04436 MARK2P10-201ENST00000454959 1437 ntBASIC7.21□□□□□ -1.25
P04436 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC7.21□□□□□ -1.25
P04436 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
P04436 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC7.21□□□□□ -1.26
P04436 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
P04436 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC7.21□□□□□ -1.26
P04436 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC7.21□□□□□ -1.26
P04436 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
P04436 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
P04436 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC7.21□□□□□ -1.26
P04436 AL450124.1-201ENST00000376401 353 ntBASIC7.21□□□□□ -1.26
P04436 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
P04436 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
P04436 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC7.21□□□□□ -1.26
P04436 FTH1P26-201ENST00000406512 701 ntBASIC7.21□□□□□ -1.26
P04436 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.21□□□□□ -1.26
P04436 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.21□□□□□ -1.26
P04436 RBMY2GP-201ENST00000418671 1034 ntBASIC7.21□□□□□ -1.26
P04436 PRPS1P2-201ENST00000430496 937 ntBASIC7.21□□□□□ -1.26
P04436 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC7.21□□□□□ -1.26
P04436 RBMY2NP-201ENST00000434454 1028 ntBASIC7.21□□□□□ -1.26
P04436 AC239860.1-201ENST00000444680 1270 ntBASIC7.21□□□□□ -1.26
P04436 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
P04436 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
P04436 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
P04436 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC7.21□□□□□ -1.26
P04436 AC114300.1-201ENST00000502347 280 ntBASIC7.21□□□□□ -1.26
P04436 AC109439.1-201ENST00000511236 715 ntBASIC7.21□□□□□ -1.26
P04436 AC114801.1-201ENST00000512633 297 ntBASIC7.21□□□□□ -1.26
P04436 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC7.21□□□□□ -1.26
P04436 AC244131.1-201ENST00000542152 922 ntBASIC7.21□□□□□ -1.26
P04436 AL355076.3-201ENST00000555838 587 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms