Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC018554.3-201ENST00000614215 1026 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC141557.2-201ENST00000621330 482 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 SLAMF7-207ENST00000458602 2449 ntTSL 2 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 PCDH9-204ENST00000544246 6234 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 TUBBP10-201ENST00000427668 1301 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 ORC2-201ENST00000234296 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC105105.1-201ENST00000591360 2553 ntTSL 2 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 LINC01838-201ENST00000595783 1657 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 ENTPD3-AS1-202ENST00000425156 2036 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 AC011815.2-201ENST00000618230 2021 ntBASIC9.99□□□□□ -0.81
LRCH3Q96II8 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC9.99□□□□□ -0.81
LRCH3Q96II8 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 CD3G-206ENST00000532917 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 SAMD8-204ENST00000542569 6782 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
LRCH3Q96II8 VPS45-202ENST00000369130 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 MAT2B-202ENST00000321757 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 CLEC4M-205ENST00000394122 1898 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 SPO11-202ENST00000371260 1608 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 OR1N1-201ENST00000304880 936 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AL603865.2-201ENST00000401679 213 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 MIR1184-2-201ENST00000408263 99 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 MIR1184-1-201ENST00000408606 99 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 MIR1184-3-201ENST00000408676 99 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 RN7SKP169-201ENST00000411124 291 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 PPIAP2-201ENST00000414143 492 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 RPS27AP7-201ENST00000422792 455 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 KRT18P49-201ENST00000427083 832 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC239367.1-201ENST00000439389 936 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC246785.1-201ENST00000440916 264 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC107613.1-201ENST00000450488 1018 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 RNU6-956P-201ENST00000458868 103 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AL157777.1-201ENST00000468100 304 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC090543.1-201ENST00000492168 485 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 PDCL2P2-201ENST00000533651 189 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC011611.6-201ENST00000547483 255 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC009060.2-201ENST00000569264 106 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC007785.3-201ENST00000595955 544 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 KC877982.1-201ENST00000602313 470 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC138904.2-201ENST00000614412 107 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC013476.2-201ENST00000614456 459 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AL606760.4-201ENST00000617613 718 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 AL356321.1-201ENST00000621360 228 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 FER-210ENST00000628534 558 ntTSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 RBM26-AS1-201ENST00000456602 1756 ntTSL 2 BASIC9.98□□□□□ -0.81
LRCH3Q96II8 ZNF548-202ENST00000366197 4955 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 AC026362.2-201ENST00000624878 5566 ntBASIC9.98□□□□□ -0.81
LRCH3Q96II8 TRAPPC2-201ENST00000359680 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
LRCH3Q96II8 CDCA7-201ENST00000306721 2789 ntTSL 2 BASIC9.97□□□□□ -0.81
LRCH3Q96II8 AC002451.2-201ENST00000624998 2398 ntBASIC9.97□□□□□ -0.81
LRCH3Q96II8 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC9.97□□□□□ -0.81
LRCH3Q96II8 GLI1-207ENST00000543426 3394 ntTSL 5 BASIC9.97□□□□□ -0.81
LRCH3Q96II8 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC9.97□□□□□ -0.81
LRCH3Q96II8 AC092326.2-201ENST00000624772 1561 ntBASIC9.97□□□□□ -0.81
LRCH3Q96II8 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
LRCH3Q96II8 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LRCH3Q96II8 AC110079.1-201ENST00000567913 4395 ntTSL 5 BASIC9.97□□□□□ -0.81
LRCH3Q96II8 LRRC7-204ENST00000415775 3996 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms