Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 AC051619.3-201ENST00000560646 2426 ntBASIC7.37□□□□□ -1.23
SNX18Q96RF0 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SNX18Q96RF0 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC7.37□□□□□ -1.23
SNX18Q96RF0 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 FADS2P1-201ENST00000611807 1446 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 EEF1A1P13-201ENST00000503537 1389 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 NF1P2-201ENST00000556855 2505 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 RPL4P3-201ENST00000428881 1311 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC241584.2-201ENST00000637142 2090 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AHCYP5-201ENST00000331585 1238 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 PPIH-203ENST00000372550 665 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC234778.1-201ENST00000399253 370 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 LRRC72-202ENST00000401542 1000 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 ANXA2P3-201ENST00000404883 1008 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 PUDPP1-201ENST00000421058 495 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 AP001116.1-201ENST00000421604 762 ntTSL 3 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AL441963.1-201ENST00000435137 792 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 MTCO3P17-201ENST00000443775 513 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 RN7SL223P-201ENST00000470401 294 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 MTND2P31-201ENST00000512602 616 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 OR4C9P-201ENST00000532368 925 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC034102.1-201ENST00000552016 604 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 WWOX-AS1-201ENST00000567099 443 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AP000915.1-201ENST00000580756 548 ntTSL 3 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC139085.1-201ENST00000582716 182 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 AL021878.2-201ENST00000602718 399 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC009686.2-201ENST00000607017 577 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 SNHG5-218ENST00000623901 711 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 THAP12P3-201ENST00000456373 2266 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 XKRY2-202ENST00000623874 1581 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 XKRY-202ENST00000624960 1581 ntBASIC7.36□□□□□ -1.23
SNX18Q96RF0 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SNX18Q96RF0 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
SNX18Q96RF0 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 TARS2P1-201ENST00000506124 2041 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 PSMC1-202ENST00000543772 1389 ntTSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 AC007342.9-201ENST00000623877 1385 ntBASIC7.35□□□□□ -1.23
SNX18Q96RF0 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.35□□□□□ -1.23
SNX18Q96RF0 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SNX18Q96RF0 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms