Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 LINC00606-201ENST00000412578 2869 ntTSL 2 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 P2RX7-202ENST00000328963 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 STRIP1-202ENST00000369796 3125 ntTSL 2 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 TMEM196-202ENST00000405844 4054 ntTSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AL590132.1-201ENST00000639602 4455 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC117529.1-201ENST00000505789 2023 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 OGDH-201ENST00000222673 4181 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 RNU6-618P-201ENST00000363518 112 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 RNU6-1119P-201ENST00000384349 108 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 CAV1-204ENST00000393470 598 ntTSL 4 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 RFKP1-201ENST00000400940 428 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 BTF3P7-201ENST00000407097 488 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 RN7SKP120-201ENST00000410761 341 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 FAM96AP2-201ENST00000414727 477 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 ATG4AP1-201ENST00000416893 538 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 NPM1P11-201ENST00000417106 855 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AL109913.1-201ENST00000421173 514 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 FKBP1AP3-201ENST00000423650 319 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 RPL36AP35-201ENST00000426082 308 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 EEF1A1P39-201ENST00000440791 250 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 AL390026.1-201ENST00000456647 457 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC023794.3-204ENST00000510754 236 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 GAPDHP71-201ENST00000511530 1003 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC091965.2-201ENST00000512324 613 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 RPPH1-3P-201ENST00000516541 322 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 PLBD1-AS1-201ENST00000542401 539 ntTSL 4 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC027682.4-202ENST00000565929 515 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 RN7SL118P-201ENST00000580570 302 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 OR7A11P-201ENST00000597719 953 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 OR8A1-204ENST00000642111 1145 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 HHLA2-205ENST00000467562 1457 ntTSL 2 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 LINC01572-206ENST00000624829 1666 ntTSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 LINC01120-201ENST00000437751 1861 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 RPL23AP7-202ENST00000416673 2078 ntTSL 2 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 ZNF30-201ENST00000303586 2579 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 KDM4D-203ENST00000610872 2191 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 TATDN2-203ENST00000448281 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 AC009102.1-201ENST00000564074 1777 ntTSL 2 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 OGFOD1P1-201ENST00000447552 1592 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 CASC19-238ENST00000641523 1558 ntBASIC10.01□□□□□ -0.81
LRCH3Q96II8 VIT-205ENST00000404084 2438 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
LRCH3Q96II8 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 TBX22-201ENST00000373294 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LRCH3Q96II8 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 LINC02362-203ENST00000617323 2044 ntTSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
LRCH3Q96II8 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC10□□□□□ -0.81
LRCH3Q96II8 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 LINC01964-201ENST00000567718 3137 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 SLC6A16-201ENST00000335875 2938 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
LRCH3Q96II8 AC092447.7-201ENST00000422212 1621 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 ZSWIM2-201ENST00000295131 2091 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC10□□□□□ -0.81
LRCH3Q96II8 EBF2-201ENST00000408929 1888 ntTSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 FOXO3-203ENST00000540898 2553 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 HAL-201ENST00000261208 3913 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
LRCH3Q96II8 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC10□□□□□ -0.81
LRCH3Q96II8 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 C4orf46-201ENST00000379205 3521 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 SEZ6L-205ENST00000403121 3078 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC10□□□□□ -0.81
LRCH3Q96II8 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC10□□□□□ -0.81
LRCH3Q96II8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC10□□□□□ -0.81
LRCH3Q96II8 RNU6-181P-201ENST00000363225 107 ntBASIC10□□□□□ -0.81
LRCH3Q96II8 RNA5SP263-201ENST00000363376 128 ntBASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms