Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 CCDC162P-202ENST00000368966 6751 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 DZANK1-204ENST00000358866 3310 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AL049833.3-201ENST00000623920 3738 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 SNORA71D-201ENST00000363484 134 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 MTND2P15-201ENST00000418575 892 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 RPSAP59-201ENST00000421048 890 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 SEPHS1P1-201ENST00000426891 958 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 RPS3P7-201ENST00000488662 726 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC098583.2-201ENST00000504151 372 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 MIR4262-201ENST00000578394 54 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AF186192.2-204ENST00000581667 524 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC008833.1-201ENST00000611633 691 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC114324.1-201ENST00000504077 3152 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 OR9M1P-202ENST00000641564 3163 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 AC093768.1-201ENST00000505987 2173 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 RNF19BPY-201ENST00000458209 1550 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 AL138847.1-201ENST00000258651 546 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 MIR135B-201ENST00000362189 97 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 RN7SKP133-201ENST00000364845 340 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 OR1F12-201ENST00000402365 945 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 CCNYL3-201ENST00000407030 998 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 RN7SKP119-201ENST00000410753 273 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 RPL4P4-201ENST00000422486 1284 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 RPL17P35-201ENST00000432217 549 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 OR3B1P-201ENST00000437536 893 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 CYP4F25P-201ENST00000446871 520 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 LINC01937-201ENST00000448543 553 ntTSL 4 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 CRYAB-203ENST00000525823 915 ntTSL 2 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 OR4C9P-201ENST00000532368 925 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 DNM1P34-202ENST00000567850 315 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 GMFG-204ENST00000595636 487 ntTSL 2 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 AC253576.2-201ENST00000618815 580 ntBASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
FNDC3BQ53EP0 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms