Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 LINC01548-201ENST00000451980 696 ntTSL 5 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC113208.1-201ENST00000497944 318 ntBASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 FLJ21408-204ENST00000566854 601 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AL358335.3-201ENST00000604678 327 ntBASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC104117.5-201ENST00000606195 547 ntBASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AP004247.4-201ENST00000608484 942 ntBASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC021766.1-201ENST00000624404 741 ntBASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AL353608.4-201ENST00000624487 1188 ntBASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AL590396.2-201ENST00000636511 1041 ntBASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 AL512504.2-201ENST00000445455 1909 ntBASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
FNDC3BQ53EP0 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 CCDC174-202ENST00000383794 2942 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PCNAP3-201ENST00000397222 778 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC133644.1-201ENST00000398171 937 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC005840.2-201ENST00000447193 355 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AL136452.1-201ENST00000448495 439 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 MTCYBP14-201ENST00000457471 715 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 NUTF2P4-201ENST00000458353 381 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC100843.1-201ENST00000475372 550 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 CASC9-201ENST00000504531 1164 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 NMNAT1P4-201ENST00000505598 840 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC091839.1-201ENST00000513087 269 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PIGFP1-201ENST00000519180 653 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 C11orf65-203ENST00000525729 1263 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 LACRT-203ENST00000547511 504 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 VDAC1P5-201ENST00000603132 844 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 TARS2P1-201ENST00000506124 2041 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 NF1P1-201ENST00000604105 2645 ntBASIC8.3□□□□□ -1.08
FNDC3BQ53EP0 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 AC110769.2-201ENST00000602760 1548 ntBASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC8.29□□□□□ -1.08
FNDC3BQ53EP0 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms