Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIR3689C-201ENST00000581239 72 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 OR7A18P-201ENST00000600416 277 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AC010719.1-201ENST00000602992 747 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AL034374.2-201ENST00000605281 548 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 RN7SL840P-201ENST00000606883 284 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AL451064.1-201ENST00000607718 471 ntBASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.39□□□□□ -1.07
CDK5RAP1Q96SZ6 MAPK10-329ENST00000641555 2656 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC008985.1-201ENST00000624169 2239 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 SMG1P1-202ENST00000309865 4223 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AL391666.1-201ENST00000442570 2764 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 OR56A1-201ENST00000316650 1071 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 GNAI2P2-201ENST00000417003 916 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC007790.1-201ENST00000439081 782 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 RN7SL508P-201ENST00000464472 303 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC092905.1-201ENST00000467527 949 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 HEXB-205ENST00000509579 806 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AL365223.1-201ENST00000574864 1297 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 RN7SL376P-201ENST00000578594 264 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AL136141.1-201ENST00000605780 369 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 TUG1_3.1-201ENST00000616187 237 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AC079456.1-201ENST00000624010 480 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 OR56A1-204ENST00000641938 1071 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 EIF3EP2-201ENST00000423042 1814 ntBASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CDK5RAP1Q96SZ6 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 RPL12P38-202ENST00000588627 2319 ntBASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDK5RAP1Q96SZ6 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms