Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC133644.1-201ENST00000398171 937 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC019070.1-201ENST00000415008 1024 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 RPL19P21-201ENST00000424919 591 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 RPL12P21-201ENST00000472214 518 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 RPL12P24-201ENST00000474907 486 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC026254.1-201ENST00000479473 431 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 TXK-203ENST00000507351 1153 ntTSL 2 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 C11orf70-202ENST00000526781 845 ntTSL 3 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 SRMP2-201ENST00000553832 916 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC013652.1-206ENST00000558277 789 ntTSL 2 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 PRR13P4-201ENST00000577786 421 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AL158151.4-201ENST00000600965 507 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AL731533.2-201ENST00000607898 578 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC245028.3-201ENST00000618197 285 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC090099.1-204ENST00000623626 849 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC010480.1-201ENST00000624823 684 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 FO393409.1-201ENST00000399325 1372 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDK5RAP1Q96SZ6 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 DLD-205ENST00000440410 1993 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AL139811.2-201ENST00000373465 1630 ntBASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 CDY3P-201ENST00000454543 1618 ntBASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 MFSD8-243ENST00000641695 1455 ntBASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 EEF1A1P15-201ENST00000395772 1408 ntBASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 C14orf159-210ENST00000518665 959 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 DTNA-220ENST00000590831 847 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AC008626.1-201ENST00000604384 255 ntBASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AC103974.2-201ENST00000611319 778 ntBASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 AC138409.1-201ENST00000505001 3598 ntBASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.41□□□□□ -1.06
CDK5RAP1Q96SZ6 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms