Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC233724.1-201ENST00000503894 233 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 RN7SKP14-201ENST00000516000 329 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 SNORA70.23-201ENST00000517218 151 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AP003174.3-201ENST00000537926 516 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC144548.1-201ENST00000549577 324 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC142086.3-201ENST00000563896 802 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC074051.4-201ENST00000564888 892 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC005609.2-201ENST00000623320 592 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 WDR11-AS1-207ENST00000630905 769 ntTSL 2 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 TPK1-214ENST00000639328 826 ntTSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC016831.3-201ENST00000446451 1723 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 RN7SKP76-201ENST00000364419 323 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 GSTA10P-201ENST00000412182 576 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 YWHAZP3-201ENST00000415292 738 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 RNA5SP287-201ENST00000516358 103 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 CCDC58P5-201ENST00000536923 432 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 DTNA-220ENST00000590831 847 ntTSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 RN7SL3-201ENST00000610674 299 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC012488.1-201ENST00000611221 640 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC087885.1-201ENST00000641910 848 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC087501.5-201ENST00000607496 2374 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 LINC02128-205ENST00000641755 1334 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 AC025040.2-201ENST00000558657 1852 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 EEF1A1P3-201ENST00000417549 1385 ntBASIC8.44□□□□□ -1.06
LMO3Q8TAP4 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 LINC01583-202ENST00000558082 2568 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LMO3Q8TAP4 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
LMO3Q8TAP4 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms