Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL031123.2-201ENST00000563225 3325 ntBASIC8.35□□□□□ -1.07
SLC1A1P43005 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SLC1A1P43005 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SLC1A1P43005 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC8.35□□□□□ -1.07
SLC1A1P43005 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SLC1A1P43005 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
SLC1A1P43005 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.35□□□□□ -1.07
SLC1A1P43005 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SLC1A1P43005 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SLC1A1P43005 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SLC1A1P43005 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.34□□□□□ -1.07
SLC1A1P43005 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 AC006058.1-201ENST00000568686 5067 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
SLC1A1P43005 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 CENPW-202ENST00000368326 443 ntTSL 2 BASIC8.34□□□□□ -1.07
SLC1A1P43005 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.34□□□□□ -1.07
SLC1A1P43005 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
SLC1A1P43005 Z74696.1-201ENST00000428208 1123 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC8.34□□□□□ -1.07
SLC1A1P43005 OR7H1P-201ENST00000448965 922 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC8.34□□□□□ -1.07
SLC1A1P43005 RN7SL107P-201ENST00000478127 283 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 RPL23AP66-201ENST00000494341 479 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC8.34□□□□□ -1.07
SLC1A1P43005 HSD3BP4-201ENST00000511509 1120 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 GNPDA1-212ENST00000513454 980 ntTSL 5 BASIC8.34□□□□□ -1.07
SLC1A1P43005 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC8.34□□□□□ -1.07
SLC1A1P43005 AC078886.1-201ENST00000549144 554 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC8.34□□□□□ -1.07
SLC1A1P43005 AC005758.1-201ENST00000586408 625 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 RPL23AP77-201ENST00000588044 463 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.34□□□□□ -1.07
SLC1A1P43005 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC8.34□□□□□ -1.07
SLC1A1P43005 RNVU1-19-201ENST00000613023 167 ntBASIC8.34□□□□□ -1.07
SLC1A1P43005 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
SLC1A1P43005 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
SLC1A1P43005 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
SLC1A1P43005 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 LINC02071-201ENST00000514726 1723 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SLC1A1P43005 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.34□□□□□ -1.08
SLC1A1P43005 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.34□□□□□ -1.08
SLC1A1P43005 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
SLC1A1P43005 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
SLC1A1P43005 AC068860.1-201ENST00000623701 3736 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 DTNA-209ENST00000556414 1626 ntTSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 GPI-202ENST00000415930 4000 ntTSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 RNU1-11P-201ENST00000383975 164 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 DNAJB1-202ENST00000396969 1287 ntTSL 2 BASIC8.33□□□□□ -1.08
SLC1A1P43005 AL161787.1-201ENST00000401543 174 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 SNORD3J-201ENST00000408473 190 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 AL590240.2-201ENST00000413370 894 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.33□□□□□ -1.08
SLC1A1P43005 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SLC1A1P43005 OR5M13P-201ENST00000433944 937 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC8.33□□□□□ -1.08
SLC1A1P43005 OR2AI1P-201ENST00000448534 932 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC8.33□□□□□ -1.08
SLC1A1P43005 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC8.33□□□□□ -1.08
SLC1A1P43005 AP000445.1-201ENST00000526692 741 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 AP001767.2-201ENST00000527291 382 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 AC007751.2-201ENST00000534173 291 ntBASIC8.33□□□□□ -1.08
SLC1A1P43005 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
SLC1A1P43005 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC8.33□□□□□ -1.08
SLC1A1P43005 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SLC1A1P43005 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms