Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGB6Q9Y5F9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 FEM1AP1-201ENST00000431297 1995 ntBASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 POU5F1P3-201ENST00000428824 1078 ntBASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 AC091874.3-201ENST00000512672 1195 ntBASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 MIR4651-201ENST00000582622 73 ntBASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGB6Q9Y5F9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGB6Q9Y5F9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB6Q9Y5F9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB6Q9Y5F9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB6Q9Y5F9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGB6Q9Y5F9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHGB6Q9Y5F9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.02■□□□□ 0.63
PCDHGB6Q9Y5F9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 AC083880.1-201ENST00000608266 535 ntBASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 AL049796.1-201ENST00000565336 1766 ntBASIC19.01■□□□□ 0.63
PCDHGB6Q9Y5F9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 RNA5SP413-201ENST00000516373 109 ntBASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 ITM2C-210ENST00000620962 501 ntBASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGB6Q9Y5F9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms