Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UBE2D4Q9Y2X8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 DPP3P2-201ENST00000416030 1696 ntBASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 AC079140.4-201ENST00000507448 529 ntBASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 AP001330.3-201ENST00000520123 633 ntBASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D4Q9Y2X8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 AL691432.2-201ENST00000607222 2038 ntBASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 AL354811.1-201ENST00000610286 706 ntBASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 RASA4CP-201ENST00000424092 1398 ntBASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
UBE2D4Q9Y2X8 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 AP000974.1-201ENST00000623909 2387 ntBASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 KRT8P36-201ENST00000489121 1440 ntBASIC14.02□□□□□ -0.16
UBE2D4Q9Y2X8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 EDA-201ENST00000338901 1233 ntBASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 PBX2P1-201ENST00000493219 1291 ntBASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D4Q9Y2X8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms