Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.64■■□□□ 1.54
ZC3H4Q9UPT8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.64■■□□□ 1.54
ZC3H4Q9UPT8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3H4Q9UPT8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.64■■□□□ 1.54
ZC3H4Q9UPT8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3H4Q9UPT8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3H4Q9UPT8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZC3H4Q9UPT8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
ZC3H4Q9UPT8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.64■■□□□ 1.53
ZC3H4Q9UPT8 AC092053.2-201ENST00000640557 1818 ntBASIC24.64■■□□□ 1.53
ZC3H4Q9UPT8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.64■■□□□ 1.53
ZC3H4Q9UPT8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
ZC3H4Q9UPT8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 NIFKP9-201ENST00000419265 221 ntBASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 KRT18P48-201ENST00000434763 852 ntBASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZC3H4Q9UPT8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 AC009947.2-201ENST00000444014 672 ntBASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 C2orf69P3-201ENST00000565542 1120 ntBASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 KRT16P1-201ENST00000399124 1418 ntBASIC24.62■■□□□ 1.53
ZC3H4Q9UPT8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 BX664615.1-201ENST00000443558 458 ntBASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 AK4P3-201ENST00000418260 669 ntBASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 CRYGFP-201ENST00000418459 633 ntBASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 AC023632.3-201ENST00000521633 145 ntBASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 EGLN1P1-201ENST00000531623 762 ntBASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.61■■□□□ 1.53
ZC3H4Q9UPT8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 FAM8A6P-201ENST00000407496 1135 ntBASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.6■■□□□ 1.53
ZC3H4Q9UPT8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 TSPY14P-201ENST00000303979 915 ntBASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 AC026396.1-201ENST00000419388 421 ntBASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.59■■□□□ 1.53
ZC3H4Q9UPT8 AP005242.2-201ENST00000580065 1175 ntBASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms