Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTSFQ9UBX1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 AC069544.1-201ENST00000609399 999 ntBASIC19.03■□□□□ 0.64
CTSFQ9UBX1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 AC007375.3-201ENST00000600936 2314 ntBASIC19.03■□□□□ 0.64
CTSFQ9UBX1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 FP700111.2-201ENST00000619190 1892 ntBASIC19.03■□□□□ 0.64
CTSFQ9UBX1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTSFQ9UBX1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 KRT17P3-201ENST00000420566 1262 ntBASIC19.02■□□□□ 0.64
CTSFQ9UBX1 POM121L13P-201ENST00000422362 380 ntBASIC19.02■□□□□ 0.64
CTSFQ9UBX1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 AC142381.4-202ENST00000563973 229 ntBASIC19.02■□□□□ 0.64
CTSFQ9UBX1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CTSFQ9UBX1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTSFQ9UBX1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CTSFQ9UBX1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTSFQ9UBX1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 AC006128.1-201ENST00000624704 1661 ntBASIC19.01■□□□□ 0.63
CTSFQ9UBX1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 AC093827.2-201ENST00000512654 315 ntBASIC19.01■□□□□ 0.63
CTSFQ9UBX1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.01■□□□□ 0.63
CTSFQ9UBX1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19■□□□□ 0.63
CTSFQ9UBX1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19■□□□□ 0.63
CTSFQ9UBX1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTSFQ9UBX1 AL390719.1-204ENST00000412397 1219 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms