Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRFN1Q9P244 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 KRT8P36-201ENST00000489121 1440 ntBASIC18.57■□□□□ 0.56
LRFN1Q9P244 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.57■□□□□ 0.56
LRFN1Q9P244 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 RN7SL471P-201ENST00000580476 299 ntBASIC18.57■□□□□ 0.56
LRFN1Q9P244 AL359736.2-201ENST00000621992 437 ntBASIC18.57■□□□□ 0.56
LRFN1Q9P244 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.57■□□□□ 0.56
LRFN1Q9P244 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRFN1Q9P244 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN1Q9P244 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN1Q9P244 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN1Q9P244 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN1Q9P244 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 RPPH1-201ENST00000516869 333 ntBASIC18.56■□□□□ 0.56
LRFN1Q9P244 AC233263.1-201ENST00000578059 224 ntBASIC18.56■□□□□ 0.56
LRFN1Q9P244 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 LINC00565-201ENST00000562710 2331 ntBASIC18.56■□□□□ 0.56
LRFN1Q9P244 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRFN1Q9P244 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRFN1Q9P244 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 UBE2SP1-201ENST00000450587 669 ntBASIC18.55■□□□□ 0.56
LRFN1Q9P244 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
LRFN1Q9P244 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRFN1Q9P244 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN1Q9P244 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN1Q9P244 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN1Q9P244 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN1Q9P244 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN1Q9P244 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN1Q9P244 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRFN1Q9P244 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 AC120498.8-201ENST00000614275 531 ntBASIC18.54■□□□□ 0.56
LRFN1Q9P244 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.54■□□□□ 0.56
LRFN1Q9P244 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms