Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CISHQ9NSE2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 AC091874.3-201ENST00000512672 1195 ntBASIC21.59■■□□□ 1.05
CISHQ9NSE2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.59■■□□□ 1.05
CISHQ9NSE2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CISHQ9NSE2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CISHQ9NSE2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CISHQ9NSE2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.59■■□□□ 1.05
CISHQ9NSE2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CISHQ9NSE2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CISHQ9NSE2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
CISHQ9NSE2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CISHQ9NSE2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.58■■□□□ 1.05
CISHQ9NSE2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.58■■□□□ 1.05
CISHQ9NSE2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CISHQ9NSE2 AC073210.2-201ENST00000430369 194 ntBASIC21.58■■□□□ 1.05
CISHQ9NSE2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CISHQ9NSE2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.58■■□□□ 1.05
CISHQ9NSE2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.58■■□□□ 1.04
CISHQ9NSE2 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.58■■□□□ 1.04
CISHQ9NSE2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CISHQ9NSE2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
CISHQ9NSE2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CISHQ9NSE2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.58■■□□□ 1.04
CISHQ9NSE2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.57■■□□□ 1.04
CISHQ9NSE2 AL162377.1-201ENST00000618844 1793 ntBASIC21.57■■□□□ 1.04
CISHQ9NSE2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 AC069152.1-201ENST00000438030 544 ntBASIC21.57■■□□□ 1.04
CISHQ9NSE2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.57■■□□□ 1.04
CISHQ9NSE2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CISHQ9NSE2 MYC-209ENST00000641252 345 ntBASIC21.57■■□□□ 1.04
CISHQ9NSE2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CISHQ9NSE2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.57■■□□□ 1.04
CISHQ9NSE2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.57■■□□□ 1.04
CISHQ9NSE2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CISHQ9NSE2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CISHQ9NSE2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.56■■□□□ 1.04
CISHQ9NSE2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.56■■□□□ 1.04
CISHQ9NSE2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.56■■□□□ 1.04
CISHQ9NSE2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.56■■□□□ 1.04
CISHQ9NSE2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.56■■□□□ 1.04
CISHQ9NSE2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CISHQ9NSE2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CISHQ9NSE2 PTBP1P-201ENST00000554374 1601 ntBASIC21.55■■□□□ 1.04
CISHQ9NSE2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CISHQ9NSE2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.55■■□□□ 1.04
CISHQ9NSE2 AC133041.1-202ENST00000642053 222 ntBASIC21.55■■□□□ 1.04
CISHQ9NSE2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CISHQ9NSE2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.55■■□□□ 1.04
CISHQ9NSE2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.55■■□□□ 1.04
CISHQ9NSE2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CISHQ9NSE2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.55■■□□□ 1.04
CISHQ9NSE2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CISHQ9NSE2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CISHQ9NSE2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CISHQ9NSE2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CISHQ9NSE2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CISHQ9NSE2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CISHQ9NSE2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 AC097658.1-201ENST00000475555 843 ntBASIC21.54■■□□□ 1.04
CISHQ9NSE2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CISHQ9NSE2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CISHQ9NSE2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CISHQ9NSE2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CISHQ9NSE2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.53■■□□□ 1.04
CISHQ9NSE2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.53■■□□□ 1.04
CISHQ9NSE2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms