Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 AC007322.4-201ENST00000509611 723 ntBASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 MFSD11-216ENST00000590393 1141 ntBASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 AL162412.1-201ENST00000567129 965 ntBASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC68Q9H2F9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 BID-214ENST00000617586 542 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC68Q9H2F9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 AC011767.1-201ENST00000617410 1153 ntBASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 KRT8P36-201ENST00000489121 1440 ntBASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC68Q9H2F9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 AC006015.1-201ENST00000429970 570 ntBASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC68Q9H2F9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms