Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 AC124283.5-201ENST00000624661 1809 ntBASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
RTFDC1Q9BY42 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 KRT18P35-201ENST00000510488 1269 ntBASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 AL117328.2-201ENST00000624617 1940 ntBASIC24.73■■□□□ 1.55
RTFDC1Q9BY42 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 RBM17P1-201ENST00000453646 1190 ntBASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 AC092865.7-201ENST00000641832 219 ntBASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.72■■□□□ 1.55
RTFDC1Q9BY42 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 NUDT16P1-203ENST00000513809 620 ntBASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RTFDC1Q9BY42 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.7■■□□□ 1.55
RTFDC1Q9BY42 AC079598.2-202ENST00000546624 1451 ntBASIC24.7■■□□□ 1.55
RTFDC1Q9BY42 KRT8P36-201ENST00000489121 1440 ntBASIC24.7■■□□□ 1.55
RTFDC1Q9BY42 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
RTFDC1Q9BY42 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RTFDC1Q9BY42 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 MIR6786-201ENST00000616843 113 ntBASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 KRT8P9-201ENST00000558927 1449 ntBASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 AC133561.1-201ENST00000568600 2415 ntBASIC24.69■■□□□ 1.54
RTFDC1Q9BY42 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 AC027702.1-201ENST00000563810 1770 ntBASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 REXO1L10P-201ENST00000615707 1290 ntBASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 AL121906.2-201ENST00000621597 723 ntBASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.68■■□□□ 1.54
RTFDC1Q9BY42 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms