Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.04□□□□□ -0.16
UPK3BQ9BT76 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UPK3BQ9BT76 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK3BQ9BT76 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UPK3BQ9BT76 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK3BQ9BT76 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UPK3BQ9BT76 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 AC011484.1-201ENST00000377652 1995 ntBASIC14.03□□□□□ -0.16
UPK3BQ9BT76 FBXW4P1-201ENST00000426721 2239 ntBASIC14.03□□□□□ -0.16
UPK3BQ9BT76 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK3BQ9BT76 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
UPK3BQ9BT76 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.02□□□□□ -0.16
UPK3BQ9BT76 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK3BQ9BT76 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK3BQ9BT76 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.02□□□□□ -0.16
UPK3BQ9BT76 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.02□□□□□ -0.16
UPK3BQ9BT76 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 ABHD17AP1-201ENST00000358206 933 ntBASIC14.02□□□□□ -0.17
UPK3BQ9BT76 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.02□□□□□ -0.17
UPK3BQ9BT76 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
UPK3BQ9BT76 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 RNA5SP413-201ENST00000516373 109 ntBASIC14.01□□□□□ -0.17
UPK3BQ9BT76 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK3BQ9BT76 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
UPK3BQ9BT76 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
UPK3BQ9BT76 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14□□□□□ -0.17
UPK3BQ9BT76 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK3BQ9BT76 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK3BQ9BT76 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
UPK3BQ9BT76 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14□□□□□ -0.17
UPK3BQ9BT76 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK3BQ9BT76 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14□□□□□ -0.17
UPK3BQ9BT76 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14□□□□□ -0.17
UPK3BQ9BT76 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK3BQ9BT76 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14□□□□□ -0.17
UPK3BQ9BT76 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK3BQ9BT76 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14□□□□□ -0.17
UPK3BQ9BT76 HLA-B-256ENST00000639848 1089 ntBASIC14□□□□□ -0.17
UPK3BQ9BT76 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
UPK3BQ9BT76 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UPK3BQ9BT76 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms