Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE1Q99829 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE1Q99829 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CPNE1Q99829 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CPNE1Q99829 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPNE1Q99829 ZNRF2P3-201ENST00000424200 374 ntBASIC20.19■□□□□ 0.82
CPNE1Q99829 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE1Q99829 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.19■□□□□ 0.82
CPNE1Q99829 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPNE1Q99829 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE1Q99829 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE1Q99829 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CPNE1Q99829 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE1Q99829 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE1Q99829 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPNE1Q99829 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 BX119927.1-201ENST00000636596 1552 ntBASIC20.18■□□□□ 0.82
CPNE1Q99829 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE1Q99829 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPNE1Q99829 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE1Q99829 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE1Q99829 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CPNE1Q99829 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE1Q99829 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE1Q99829 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CPNE1Q99829 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CPNE1Q99829 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.17■□□□□ 0.82
CPNE1Q99829 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.17■□□□□ 0.82
CPNE1Q99829 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE1Q99829 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.17■□□□□ 0.82
CPNE1Q99829 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.17■□□□□ 0.82
CPNE1Q99829 AC087633.2-202ENST00000565166 1439 ntBASIC20.17■□□□□ 0.82
CPNE1Q99829 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.17■□□□□ 0.82
CPNE1Q99829 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.17■□□□□ 0.82
CPNE1Q99829 AC125437.2-201ENST00000625180 2167 ntBASIC20.17■□□□□ 0.82
CPNE1Q99829 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE1Q99829 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.16■□□□□ 0.82
CPNE1Q99829 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.16■□□□□ 0.82
CPNE1Q99829 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CPNE1Q99829 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CPNE1Q99829 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE1Q99829 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 AL691432.2-201ENST00000607222 2038 ntBASIC20.16■□□□□ 0.82
CPNE1Q99829 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPNE1Q99829 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE1Q99829 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.16■□□□□ 0.82
CPNE1Q99829 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE1Q99829 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.16■□□□□ 0.82
CPNE1Q99829 AL356652.1-201ENST00000615962 565 ntBASIC20.16■□□□□ 0.82
CPNE1Q99829 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CPNE1Q99829 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPNE1Q99829 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.16■□□□□ 0.82
CPNE1Q99829 TMEM179-206ENST00000616017 1645 ntBASIC20.16■□□□□ 0.82
CPNE1Q99829 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms