Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NUDCD1Q96RS6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
NUDCD1Q96RS6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NUDCD1Q96RS6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NUDCD1Q96RS6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 AL512625.2-201ENST00000417533 625 ntBASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NUDCD1Q96RS6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 NCF1B-203ENST00000435988 1254 ntBASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 AF201337.1-201ENST00000520239 748 ntBASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 AL121832.2-201ENST00000610979 668 ntBASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 AC100791.3-201ENST00000617619 330 ntBASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 AC006128.1-201ENST00000624704 1661 ntBASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 AC027702.1-201ENST00000563810 1770 ntBASIC20.8■□□□□ 0.92
NUDCD1Q96RS6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NUDCD1Q96RS6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms