Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.72■■□□□ 1.07
CASD1Q96PB1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.72■■□□□ 1.07
CASD1Q96PB1 AC121338.2-201ENST00000622535 1744 ntBASIC21.72■■□□□ 1.07
CASD1Q96PB1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.71■■□□□ 1.07
CASD1Q96PB1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.71■■□□□ 1.07
CASD1Q96PB1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CASD1Q96PB1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CASD1Q96PB1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CASD1Q96PB1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CASD1Q96PB1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CASD1Q96PB1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.7■■□□□ 1.06
CASD1Q96PB1 KRT16P5-201ENST00000455284 522 ntBASIC21.7■■□□□ 1.06
CASD1Q96PB1 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.7■■□□□ 1.06
CASD1Q96PB1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CASD1Q96PB1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CASD1Q96PB1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CASD1Q96PB1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CASD1Q96PB1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.7■■□□□ 1.06
CASD1Q96PB1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CASD1Q96PB1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CASD1Q96PB1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.69■■□□□ 1.06
CASD1Q96PB1 AC087499.1-201ENST00000418141 1075 ntBASIC21.69■■□□□ 1.06
CASD1Q96PB1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.69■■□□□ 1.06
CASD1Q96PB1 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.69■■□□□ 1.06
CASD1Q96PB1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 NBPF21P-201ENST00000425093 1451 ntBASIC21.69■■□□□ 1.06
CASD1Q96PB1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CASD1Q96PB1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASD1Q96PB1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASD1Q96PB1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASD1Q96PB1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 EP400NL-214ENST00000641289 2402 ntBASIC21.68■■□□□ 1.06
CASD1Q96PB1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CASD1Q96PB1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 AF186192.3-201ENST00000583427 947 ntBASIC21.68■■□□□ 1.06
CASD1Q96PB1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 HTR7P1-201ENST00000538670 1336 ntBASIC21.68■■□□□ 1.06
CASD1Q96PB1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASD1Q96PB1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CASD1Q96PB1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.68■■□□□ 1.06
CASD1Q96PB1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CASD1Q96PB1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASD1Q96PB1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASD1Q96PB1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.67■■□□□ 1.06
CASD1Q96PB1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CASD1Q96PB1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CASD1Q96PB1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASD1Q96PB1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.67■■□□□ 1.06
CASD1Q96PB1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.67■■□□□ 1.06
CASD1Q96PB1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.67■■□□□ 1.06
CASD1Q96PB1 AC133561.5-201ENST00000635547 218 ntBASIC21.67■■□□□ 1.06
CASD1Q96PB1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CASD1Q96PB1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CASD1Q96PB1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CASD1Q96PB1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CASD1Q96PB1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
CASD1Q96PB1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CASD1Q96PB1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.66■■□□□ 1.06
CASD1Q96PB1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASD1Q96PB1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CASD1Q96PB1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CASD1Q96PB1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.66■■□□□ 1.06
CASD1Q96PB1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.66■■□□□ 1.06
CASD1Q96PB1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms