Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 AC104187.1-201ENST00000607510 612 ntBASIC17.5■□□□□ 0.39
CPNE2Q96FN4 FAM21FP-204ENST00000608637 956 ntBASIC17.5■□□□□ 0.39
CPNE2Q96FN4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 AC005837.3-201ENST00000612163 286 ntBASIC17.49■□□□□ 0.39
CPNE2Q96FN4 AC243732.1-201ENST00000612648 864 ntBASIC17.49■□□□□ 0.39
CPNE2Q96FN4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE2Q96FN4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 AL512408.1-201ENST00000569378 2000 ntBASIC17.48■□□□□ 0.39
CPNE2Q96FN4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 SLC7A5P1-201ENST00000568957 537 ntBASIC17.48■□□□□ 0.39
CPNE2Q96FN4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.48■□□□□ 0.39
CPNE2Q96FN4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 PGM5P4-201ENST00000421970 445 ntBASIC17.47■□□□□ 0.39
CPNE2Q96FN4 AC007322.3-201ENST00000426526 701 ntBASIC17.47■□□□□ 0.39
CPNE2Q96FN4 YBX1P1-201ENST00000445822 960 ntBASIC17.47■□□□□ 0.39
CPNE2Q96FN4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 TERF1P2-201ENST00000583350 1212 ntBASIC17.47■□□□□ 0.39
CPNE2Q96FN4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 BCL2-203ENST00000589955 5011 ntBASIC17.47■□□□□ 0.39
CPNE2Q96FN4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.47■□□□□ 0.39
CPNE2Q96FN4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CPNE2Q96FN4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms