Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 AC091874.3-201ENST00000512672 1195 ntBASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 AL138781.1-201ENST00000566567 1274 ntBASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTHRC1Q96CG8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 DUSP5P2-201ENST00000426873 1033 ntBASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 MYC-209ENST00000641252 345 ntBASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTHRC1Q96CG8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 AC099778.1-201ENST00000568593 1911 ntBASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTHRC1Q96CG8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTHRC1Q96CG8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CTHRC1Q96CG8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CTHRC1Q96CG8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTHRC1Q96CG8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.77■□□□□ 0.59
CTHRC1Q96CG8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTHRC1Q96CG8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 AC023632.3-201ENST00000521633 145 ntBASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CTHRC1Q96CG8 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms