Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RNF25Q96BH1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF25Q96BH1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 CDV3P1-201ENST00000471403 739 ntBASIC21.18■□□□□ 0.98
RNF25Q96BH1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF25Q96BH1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
RNF25Q96BH1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF25Q96BH1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RNF25Q96BH1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF25Q96BH1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.17■□□□□ 0.98
RNF25Q96BH1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 KRT8P36-201ENST00000489121 1440 ntBASIC21.17■□□□□ 0.98
RNF25Q96BH1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RNF25Q96BH1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF25Q96BH1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF25Q96BH1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF25Q96BH1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF25Q96BH1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF25Q96BH1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.16■□□□□ 0.98
RNF25Q96BH1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 TERF1P5-201ENST00000477545 1207 ntBASIC21.16■□□□□ 0.98
RNF25Q96BH1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 AC010536.3-201ENST00000620306 533 ntBASIC21.16■□□□□ 0.98
RNF25Q96BH1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF25Q96BH1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF25Q96BH1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF25Q96BH1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.15■□□□□ 0.98
RNF25Q96BH1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF25Q96BH1 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF25Q96BH1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms