Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF25Q93038 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.04■■□□□ 1.28
TNFRSF25Q93038 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 AC142086.2-201ENST00000569753 217 ntBASIC23.04■■□□□ 1.28
TNFRSF25Q93038 AL109923.1-201ENST00000618799 583 ntBASIC23.04■■□□□ 1.28
TNFRSF25Q93038 MYC-209ENST00000641252 345 ntBASIC23.04■■□□□ 1.28
TNFRSF25Q93038 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNFRSF25Q93038 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TNFRSF25Q93038 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 BX119927.1-201ENST00000636596 1552 ntBASIC23.02■■□□□ 1.28
TNFRSF25Q93038 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 SLC29A4P1-201ENST00000398760 971 ntBASIC23.02■■□□□ 1.28
TNFRSF25Q93038 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.02■■□□□ 1.28
TNFRSF25Q93038 DUSP5P2-201ENST00000426873 1033 ntBASIC23.02■■□□□ 1.28
TNFRSF25Q93038 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.02■■□□□ 1.28
TNFRSF25Q93038 AC091874.3-201ENST00000512672 1195 ntBASIC23.02■■□□□ 1.28
TNFRSF25Q93038 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.02■■□□□ 1.28
TNFRSF25Q93038 AC112907.3-201ENST00000577781 2400 ntBASIC23.02■■□□□ 1.28
TNFRSF25Q93038 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF25Q93038 TCF3P1-201ENST00000423021 1937 ntBASIC23■■□□□ 1.27
TNFRSF25Q93038 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23■■□□□ 1.27
TNFRSF25Q93038 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23■■□□□ 1.27
TNFRSF25Q93038 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNFRSF25Q93038 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNFRSF25Q93038 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNFRSF25Q93038 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23■■□□□ 1.27
TNFRSF25Q93038 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNFRSF25Q93038 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
TNFRSF25Q93038 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23■■□□□ 1.27
TNFRSF25Q93038 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23■■□□□ 1.27
TNFRSF25Q93038 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNFRSF25Q93038 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23■■□□□ 1.27
TNFRSF25Q93038 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms