Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 AP004607.4-201ENST00000530158 1459 ntBASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN4IP1Q8WWV3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RTN4IP1Q8WWV3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
RTN4IP1Q8WWV3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RTN4IP1Q8WWV3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 AP001160.3-201ENST00000601484 763 ntBASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 AC087623.3-201ENST00000607047 1098 ntBASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.95■□□□□ 0.3
RTN4IP1Q8WWV3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 RARRES2P6-201ENST00000567333 442 ntBASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 AC120498.10-201ENST00000621827 505 ntBASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTN4IP1Q8WWV3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 KRT19P1-201ENST00000405746 1186 ntBASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTN4IP1Q8WWV3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms