Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC24.8■■□□□ 1.56
SNED1Q8TER0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNED1Q8TER0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SNED1Q8TER0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNED1Q8TER0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SNED1Q8TER0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNED1Q8TER0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.79■■□□□ 1.56
SNED1Q8TER0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNED1Q8TER0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.79■■□□□ 1.56
SNED1Q8TER0 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.79■■□□□ 1.56
SNED1Q8TER0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNED1Q8TER0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNED1Q8TER0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNED1Q8TER0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SNED1Q8TER0 TERF1P1-201ENST00000311003 1181 ntBASIC24.78■■□□□ 1.56
SNED1Q8TER0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNED1Q8TER0 AL049597.2-201ENST00000565575 961 ntBASIC24.78■■□□□ 1.56
SNED1Q8TER0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
SNED1Q8TER0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNED1Q8TER0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNED1Q8TER0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC24.78■■□□□ 1.56
SNED1Q8TER0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNED1Q8TER0 AC133561.1-201ENST00000568600 2415 ntBASIC24.78■■□□□ 1.56
SNED1Q8TER0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.78■■□□□ 1.56
SNED1Q8TER0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SNED1Q8TER0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC24.78■■□□□ 1.56
SNED1Q8TER0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.78■■□□□ 1.56
SNED1Q8TER0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SNED1Q8TER0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SNED1Q8TER0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.77■■□□□ 1.56
SNED1Q8TER0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNED1Q8TER0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SNED1Q8TER0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.77■■□□□ 1.56
SNED1Q8TER0 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.77■■□□□ 1.56
SNED1Q8TER0 AL121906.2-201ENST00000621597 723 ntBASIC24.77■■□□□ 1.56
SNED1Q8TER0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC24.77■■□□□ 1.56
SNED1Q8TER0 AC010947.1-201ENST00000623454 693 ntBASIC24.77■■□□□ 1.56
SNED1Q8TER0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC24.77■■□□□ 1.56
SNED1Q8TER0 CYP2D8P-201ENST00000433633 1490 ntBASIC24.76■■□□□ 1.55
SNED1Q8TER0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.76■■□□□ 1.55
SNED1Q8TER0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
SNED1Q8TER0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNED1Q8TER0 AC012676.1-201ENST00000574705 1949 ntBASIC24.76■■□□□ 1.55
SNED1Q8TER0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNED1Q8TER0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNED1Q8TER0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.76■■□□□ 1.55
SNED1Q8TER0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.76■■□□□ 1.55
SNED1Q8TER0 KRT18P57-201ENST00000443599 1254 ntBASIC24.76■■□□□ 1.55
SNED1Q8TER0 AC116562.2-201ENST00000507042 360 ntBASIC24.76■■□□□ 1.55
SNED1Q8TER0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.76■■□□□ 1.55
SNED1Q8TER0 AC005363.2-201ENST00000618631 242 ntBASIC24.76■■□□□ 1.55
SNED1Q8TER0 AL590326.2-201ENST00000625139 305 ntBASIC24.76■■□□□ 1.55
SNED1Q8TER0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNED1Q8TER0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
SNED1Q8TER0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNED1Q8TER0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SNED1Q8TER0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.75■■□□□ 1.55
SNED1Q8TER0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNED1Q8TER0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC24.75■■□□□ 1.55
SNED1Q8TER0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNED1Q8TER0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.75■■□□□ 1.55
SNED1Q8TER0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.75■■□□□ 1.55
SNED1Q8TER0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNED1Q8TER0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.75■■□□□ 1.55
SNED1Q8TER0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.75■■□□□ 1.55
SNED1Q8TER0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNED1Q8TER0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.75■■□□□ 1.55
SNED1Q8TER0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNED1Q8TER0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.75■■□□□ 1.55
SNED1Q8TER0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.75■■□□□ 1.55
SNED1Q8TER0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SNED1Q8TER0 UNC93B2-201ENST00000285383 730 ntBASIC24.74■■□□□ 1.55
SNED1Q8TER0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 AL390955.1-201ENST00000428694 934 ntBASIC24.74■■□□□ 1.55
SNED1Q8TER0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 AL031963.3-201ENST00000606441 850 ntBASIC24.74■■□□□ 1.55
SNED1Q8TER0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SNED1Q8TER0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SNED1Q8TER0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SNED1Q8TER0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.74■■□□□ 1.55
SNED1Q8TER0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SNED1Q8TER0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SNED1Q8TER0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SNED1Q8TER0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
SNED1Q8TER0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.73■■□□□ 1.55
SNED1Q8TER0 ARMC10P1-201ENST00000313754 855 ntBASIC24.73■■□□□ 1.55
SNED1Q8TER0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.73■■□□□ 1.55
SNED1Q8TER0 FITM1-202ENST00000559294 800 ntBASIC24.73■■□□□ 1.55
SNED1Q8TER0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SNED1Q8TER0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SNED1Q8TER0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SNED1Q8TER0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SNED1Q8TER0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SNED1Q8TER0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms