Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
UBA3Q8TBC4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 AC069152.1-201ENST00000438030 544 ntBASIC21.42■■□□□ 1.02
UBA3Q8TBC4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.42■■□□□ 1.02
UBA3Q8TBC4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 DPP3P2-201ENST00000416030 1696 ntBASIC21.41■■□□□ 1.02
UBA3Q8TBC4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 AC133041.1-202ENST00000642053 222 ntBASIC21.41■■□□□ 1.02
UBA3Q8TBC4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 SMG8-203ENST00000578922 2178 ntBASIC21.41■■□□□ 1.02
UBA3Q8TBC4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBA3Q8TBC4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.4■■□□□ 1.02
UBA3Q8TBC4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBA3Q8TBC4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
UBA3Q8TBC4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.39■■□□□ 1.02
UBA3Q8TBC4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
UBA3Q8TBC4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.39■■□□□ 1.02
UBA3Q8TBC4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
UBA3Q8TBC4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UBA3Q8TBC4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBA3Q8TBC4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.39■■□□□ 1.01
UBA3Q8TBC4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBA3Q8TBC4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBA3Q8TBC4 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.39■■□□□ 1.01
UBA3Q8TBC4 AC097658.1-201ENST00000475555 843 ntBASIC21.39■■□□□ 1.01
UBA3Q8TBC4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBA3Q8TBC4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
UBA3Q8TBC4 AL512408.1-201ENST00000569378 2000 ntBASIC21.39■■□□□ 1.01
UBA3Q8TBC4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBA3Q8TBC4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 AC073210.2-201ENST00000430369 194 ntBASIC21.38■■□□□ 1.01
UBA3Q8TBC4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.38■■□□□ 1.01
UBA3Q8TBC4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.38■■□□□ 1.01
UBA3Q8TBC4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms